iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112716

Ensembl Protein ID

PGSC0003DMT400034236

UniProt Accession

M1B0C8; M1B0C8_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400013161	PGSC0003DMT400034235	PGSC0003DMT400034235
PGSC0003DMG400013161	PGSC0003DMT400034236	PGSC0003DMT400034236

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-49	163.2	567	604
UBD/Beta-Prp	2.00e-95	320.7	40	223

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+ +v+c++  sd +llv+Gs D+++++W l  g+  
   Q: 567  GHNLPVFCMDIsSDgDLLVTGSADKNVRIWGLVFGDIH 604
           8999********999****************9998875 PP

UBD/Beta-Prp

   S: 117  tirvwdletgqclee....tlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsl 200
            i +w++++g c ++    + s+ ++  n v++ +++ + ++sG + +t+r+Wd++ g + +tl g h+++v+ l +++ g  l+sg++
   Q: 40   KIGIWHVRQGLCTKTltplPSSNSKAPSNAVTSISSSsSRIASGYAQGTIRIWDSEKGMCETTLNG-HKGAVTALRYNKLGSLLASGGK 127
           566677777777666666544444444443333333336677777777777777777777777766.7777777777777777777777 PP
   S: 201  dgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskv 289
           d++++lwd+ +++ + +l+gh+d+v+++ f++ ++ lv++s+D+ +r Wdl+++ +++ +++h+s ++s++  ++++++lv+gs+d ++
   Q: 128  DNDIILWDVVAETGLFRLRGHRDQVTDLVFLDSGNKLVTASKDKFLRAWDLDTQHCMQIISGHHSEIWSIDI-DPEEKYLVTGSADPEL 215
           777777777766666777777777777777777777777777777777777777777777777777777776.6777777777777666 PP
   S: 290  niwklkkn 297
           ++++ + +
   Q: 216  RFYSINHE 223
           66666544 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MVKSYLRYEP AACFGVIVSV ESKIAYDSSG KHLLVPALEK IGIWHVRQGL CTKTLTPLPS 60
SNSKAPSNAV TSISSSSSRI ASGYAQGTIR IWDSEKGMCE TTLNGHKGAV TALRYNKLGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAACAGTCAG AGCATTGGAG TTTGGAATGT ATCAATATAA ATTAAAAAAA AGTATAATCC 60
AAAACCCCTG ATAAAGTTAA ACCCTAACAA TCAGAGCATG GTGAAATCGT ATCTCCGGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sot:102582969

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gmo-039018	Gadus morhua	36.21	5.00e-90	323.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence