iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007198

UUCD1 version

UUC-ArT-00599

Ensembl Protein ID

AT1G10650.1

UniProt Accession

Q84JF9; Q84JF9_ARATH

Genbank Protein ID

AAO22697.1; AAO42398.1; AAY63560.1; AEE28613.1

Protein Name

Putative S-ribonuclease binding protein SBP1; RING domain protein; SBP (S-ribonuclease binding protein) family protein

Genbank Nucleotide ID

BT002880; BT004404; DQ059088; CP002684

Gene Name

At1g10650; F20B24.9; F20B24_9

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G10650	AT1G10650.1	AT1G10650.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
HINT
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	16339806

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MLSGNNGNTA PPVFMNENQL QYQTNLRSNQ LHLLGNMGGG CTVDPVNYFA NDNLVPMIRP 60
NKRGREAESI SNNIQRQQQK LQMSLNYNYN NTSVREEVPK ENLVSTGLRL SYDDDEHNSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATGAAAGAG AAATACACAA CTCACGAAAG AAAAGACGAG AAAGCACCAC CAACGGTTCT 60
TGTTTGGTGT TTACATTTAC TATCAACCAT TTTTTGTTTC TTTTCTCAAA GTTTTTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR017066--E3ligase_BOI
IPR001841--Znf_RING

PROSITE

PS50089--ZF_RING_2

Gene Ontology

GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0031347--P:regulation of defense response

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000151	Aegilops tauschii	34.99	5.00e-43	167.00
IUUC-Atr-002499	Amborella trichopoda	48.59	3.00e-85	307.00
IUUC-Aly-006460	Arabidopsis lyrata	93.99	6.00e-153	532.00
IUUC-Bol-016408	Brassica oleracea	83.14	1.00e-156	545.00
IUUC-Bra-017185	Brassica rapa	82.70	2.00e-160	557.00
IUUC-Cel-018117	Caenorhabditis elegans	41.86	1.00e-06	43.50
IUUC-Dse-031174	Dothistroma septosporum	34.88	7.00e-03	35.80
IUUC-Gma-043076	Glycine max	55.56	1.00e-108	385.00
IUUC-Obr-076175	Oryza brachyantha	34.29	8.00e-46	177.00
IUUC-Oin-079170	Oryza indica	35.63	8.00e-48	183.00
IUUC-Olo-081038	Oryza longistaminata	35.34	2.00e-47	182.00
IUUC-Ppa-095944	Physcomitrella patens	32.72	3.00e-32	131.00
IUUC-Pop-098944	Populus trichocarpa	59.94	4.00e-111	393.00
IUUC-Ppe-101889	Prunus persica	59.72	2.00e-118	418.00
IUUC-Smo-109461	Selaginella moellendorffii	36.36	2.00e-41	161.00
IUUC-Sit-110605	Setaria italica	36.03	1.00e-43	169.00
IUUC-Sly-110837	Solanum lycopersicum	50.43	1.00e-85	308.00
IUUC-Stu-112233	Solanum tuberosum	51.44	6.00e-87	313.00
IUUC-Sbi-114226	Sorghum bicolor	39.30	4.00e-43	167.00
IUUC-Tca-120917	Theobroma cacao	59.66	7.00e-116	409.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence