iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016719

Ensembl Protein ID

Bra010559.1-P

UniProt Accession

M4D259; M4D259_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra010559	Bra010559.1	Bra010559.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-26	93.7	231	302

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +pe+f+Cp+sl++M dPv+++sG+t++r sI++w++ g+ tcPv ++ l++ +l  n ++++ i++wc++++
   Q: 231  LPEQFKCPLSLTVMYDPVIISSGHTFERMSIQRWFDLGNDTCPVSKRVLDDFTLQSNVAMKDQISKWCKKHG 302
           79*******************************************************************997 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MHSSMCLALK NIVDRVMKIF PEIEAARPGS TTGIHTLCLL NKALEKAKLL LQYCSESSKL 60
YMAVTGDAIL SRGSRSKKLL EQSLSDIRTM VPTALSIKIL EVLQDLKSTV LSLESSEEEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCACTCTT CCATGTGCTT AGCCTTGAAG AACATAGTTG ATAGAGTTAT GAAAATCTTT 60
CCTGAAATAG AAGCTGCTAG ACCTGGATCT ACCACAGGGA TACACACTCT TTGTTTGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015917	Brassica oleracea	95.06	0.00e+00	1094.00
IUUC-Obr-076217	Oryza brachyantha	33.67	2.00e-85	310.00
IUUC-Stu-112712	Solanum tuberosum	36.61	8.00e-103	367.00
IUUC-Tur-126678	Triticum urartu	31.78	1.00e-83	304.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence