iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058137

Ensembl Protein ID

AES96774

UniProt Accession

G7KGK8; G7KGK8_MEDTR

Genbank Protein ID

AES96774.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001221

Gene Name

MTR_5g041310

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_5g041310	AES96774	AES96774

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-07	33.6	115	156

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cle+f+ g  ++ +pC+H fh +C++kw         + +CP+Cr
   Q: 115  CVVCLEEFEVGgvVKEMPCKHRFHGKCIEKW------LGIHGSCPVCR 156
           ********666446669**************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MASEAEISEI SSLFERMIRN RDMSLFLPFM LSLSQTLNNS DPDHESETNE DSTPQRIIFV 60
NPLTQSITVI DGASSIEELF NNLGSSTKNG QPPATKESIE AMDKIEIEEG DGGECVVCLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCCTCCACA AAATATCGCA ACAAATACAC CGAAATTTCA CAACACACGT AATATGTTGT 60
TCCAGATCCT TCCACGACGT TCTTTTTTCT CTCTATATCA ACTCACATCA CTTCCACTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_5g041310

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006170	Arabidopsis lyrata	44.44	4.00e-46	176.00
IUUC-Ath-007018	Arabidopsis thaliana	47.85	5.00e-45	173.00
IUUC-Bdi-014161	Brachypodium distachyon	51.43	2.00e-19	87.80
IUUC-Bol-016326	Brassica oleracea	52.15	7.00e-38	149.00
IUUC-Bra-016818	Brassica rapa	45.26	3.00e-30	123.00
IUUC-Cne-026969	Cryptococcus neoformans	37.50	1.00e-09	57.80
IUUC-Gma-042932	Glycine max	62.94	3.00e-57	214.00
IUUC-Ggo-044735	Gorilla gorilla	34.21	1.00e-13	71.20
IUUC-Lpe-051413	Leersia perrieri	41.51	9.00e-22	95.50
IUUC-Pop-099103	Populus trichocarpa	52.47	3.00e-57	213.00
IUUC-Ppe-101768	Prunus persica	55.06	5.00e-47	180.00
IUUC-Stu-112194	Solanum tuberosum	44.49	3.00e-42	164.00
IUUC-Tca-121463	Theobroma cacao	49.58	2.00e-56	211.00
IUUC-Tae-125110	Triticum aestivum	49.35	9.00e-22	95.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence