iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Spo-108213

UUCD1 version

UUC-ScP-00024

Ensembl Protein ID

SPBC56F2.01.1:pep

UniProt Accession

O60053; POF12_SCHPO

Genbank Protein ID

BAB55637.1; CAA18880.1

Protein Name

F-box protein pof12

Genbank Nucleotide ID

AB061726; CU329671

Gene Name

pof12; SPBC56F2.01

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPBC56F2.01	SPBC56F2.01.1	SPBC56F2.01.1:pep

Annotation

mRNA Expression
GEO
Protein-protein Interaction
HINT	Mentha
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/SCF/F-box	F-box	15147268

Classification

Family	E-value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	0.0023	16.1	14	55

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 106  lpeeilveilklldkeellraarvcrrwqelasqkalwktvt 147
           +++e l+++l+ l++++l +++rv+r+w+ + +++++w++++
   Q: 14   FSHETLLHVLNDLSAHDLAALERVSRSWNSIVRRSSVWHNLY 55
           568999***********************99999*****986 PP

Organism

Schizosaccharomyces pombe

Protein Sequence
(Fasta)

MTTDVKAKNP ASIFSHETLL HVLNDLSAHD LAALERVSRS WNSIVRRSSV WHNLYLSEFG 60
TKHLRRHGRI EKKRRNWKGL FRRQSNWKDG RCKKVESMLP QLLNSEKSVG EDRLGLTLTH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACGAAATGA CATTTGGTAA GCTAGGTGAC CGTTACCCTG ATAGTCTCAC TTCCTACAAC 60
AACTAAGTCA ACTTGGAGAT ACAAACGAAA CTAGTATGTC TCTATAATAC AATTTGTCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX

Gene Ontology

GO:0005634--C:nucleus
GO:0000151--C:ubiquitin ligase complex
GO:0030674--F:protein binding, bridging
GO:0016567--P:protein ubiquitination

KEGG

spo:SPBC56F2.01

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003785	Anas platyrhynchos	29.55	3.20e-02	31.60
IUUC-Aly-006360	Arabidopsis lyrata	34.78	1.90e-02	31.60
IUUC-Acl-008283	Aspergillus clavatus	21.28	5.00e-12	63.90
IUUC-Afu-008823	Aspergillus fumigatus	38.16	2.00e-08	51.20
IUUC-Ang-009582	Aspergillus niger	21.69	1.00e-09	56.20
IUUC-Ate-010506	Aspergillus terreus	25.07	1.00e-11	62.40
IUUC-Bci-013711	Botrytis cinerea	36.92	9.00e-05	40.00
IUUC-Bra-017131	Brassica rapa	36.17	1.00e-02	32.70
IUUC-Cgl-026674	Colletotrichum gloeosporioides	25.74	1.00e-06	46.20
IUUC-Dre-028616	Danio rerio	38.30	6.00e-03	33.50
IUUC-Dse-031342	Dothistroma septosporum	37.33	7.00e-08	50.10
IUUC-Eeu-034813	Erinaceus europaeus	32.69	1.00e-03	35.80
IUUC-Fox-037729	Fusarium oxysporum	28.33	4.00e-07	47.80
IUUC-Fso-038437	Fusarium solani	25.45	4.00e-05	40.80
IUUC-Ggr-039881	Gaeumannomyces graminis	36.36	5.00e-07	47.80
IUUC-Gma-044395	Glycine max	33.90	2.00e-04	37.00
IUUC-Lch-050290	Latimeria chalumnae	20.11	1.90e-02	32.00
IUUC-Lma-053148	Leptosphaeria maculans	21.97	2.00e-11	62.00
IUUC-Meu-056192	Macropus eugenii	38.10	1.00e-03	35.40
IUUC-Mor-057182	Magnaporthe oryzae	38.64	2.00e-03	35.40
IUUC-Mac-065258	Musa acuminata	35.29	3.00e-03	33.90
IUUC-Nfi-068328	Neosartorya fischeri	20.98	2.00e-12	65.10
IUUC-Ncr-068807	Neurospora crassa	34.55	2.00e-03	35.80
IUUC-Oan-072928	Ornithorhynchus anatinus	30.00	2.00e-03	34.30
IUUC-Ome-081130	Oryza meridionalis	23.74	4.00e-03	34.70
IUUC-Ppa-095448	Physcomitrella patens	36.51	4.00e-06	43.10
IUUC-Ppe-101225	Prunus persica	31.88	8.00e-03	32.30
IUUC-Pte-104054	Pyrenophora teres	20.45	3.00e-09	54.70
IUUC-Pyt-104462	Pyrenophora triticirepentis	20.83	1.00e-10	59.70
IUUC-Sja-107845	Schizosaccharomyces japonicus	28.76	2.00e-40	157.00
IUUC-Ssl-108436	Sclerotinia sclerotiorum	34.85	9.00e-04	36.20
IUUC-Stu-112725	Solanum tuberosum	30.26	6.00e-03	33.10
IUUC-Ssc-116254	Sus scrofa	20.73	1.00e-03	35.40
IUUC-Tru-117759	Takifugu rubripes	25.68	5.00e-03	33.90
IUUC-Tni-119878	Tetraodon nigroviridis	29.82	7.00e-03	33.90
IUUC-Tre-121945	Trichoderma reesei	37.88	5.00e-08	50.80
IUUC-Tvi-122264	Trichoderma virens	36.36	5.00e-07	47.40
IUUC-Tae-124508	Triticum aestivum	30.67	9.00e-04	36.60
IUUC-Tur-126361	Triticum urartu	28.95	2.00e-03	34.30
IUUC-Tme-127013	Tuber melanosporum	35.53	2.00e-07	48.90
IUUC-Vda-129883	Verticillium dahliae	30.77	2.00e-07	48.50
IUUC-Vvi-131468	Vitis vinifera	29.41	4.00e-03	33.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence