iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111124

Ensembl Protein ID

Solyc10g086430.1.1

UniProt Accession

K4D475; K4D475_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc10g086430.1	Solyc10g086430.1.1	Solyc10g086430.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-30	103.5	568	601
UBD/Beta-Prp	2.20e-40	139.5	522	739

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+d vtc++f   +d++++sGs Dg++++W++++
   Q: 568  HNDYVTCIHFnpvDDDHFISGSLDGKVRIWNISD 601
           ************766****************765 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetls 134
           + ++sgh++ v ++++s+++  l+++s D+t+++wd++t +c+  +  h+d+v++++f+p ++d+++sGs d  +r+w+++ ++++    +
   Q: 522  VCTFSGHQDDVLDLSWSSSQ-QLLSSSMDKTVRLWDIETQSCLKMFA-HNDYVTCIHFNPvDDDHFISGSLDGKVRIWNISDRKVVD--WT 608
           34566666666666666665.46666666666666666666666666.666666666666555666666666666666666666665..33 PP
   S: 135  ghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.......tgghtdsvyslsfdsng.kelvsgsldgtvklwdlqtgecvrt 217
             +++v+ ++++pdg     Gs  + +rl++ +  kl ++        ++   ++v+  +f +    e++  s d++v+++d +  e+ ++
   Q: 609  DLHEMVTATCYSPDGEGALIGSHKGSCRLYSTSECKLEQKDsfelepkKKSPAKKVTGFQFAPGNpAEVLITSADSRVRIFDGS--EMTHK 697
           333355555666666555566666666666553333322223333443333444444444555444566666666666666653..23455 PP
   S: 218  lnghtdnvksvrfs..pnderlvsgssDgsiriWdlrsgdllkt 259
           ++g +++ +++ ++  ++++++vs+s+D +++iW  +  ++ ++
   Q: 698  FKGFRNTSSQISATfsQDGKYIVSASEDSQVYIW--KREEPKSA 739
           5554444444443333666666666666666666..34444444 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MYRRTLTINW DGIGEDDDDD HFFESHDRLS TVVPQDLASS GSDDEVEFED SRRSFSASVS 60
IKNNTFPGLE MGTTTKTKTV SISDPPPPIV MEDYGMWMAE PGDVKERRKR LLQGMGLTSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTATCGCA GGACGCTGAC TATAAACTGG GATGGTATTG GAGAAGACGA TGACGATGAT 60
CACTTCTTCG AGTCCCACGA CCGCCTTTCC ACGGTGGTTC CCCAAGACTT GGCGTCCTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sly:101244822

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-016298	Brassica oleracea	50.70	0.00e+00	701.00
IUUC-Ete-032457	Echinops telfairi	32.45	3.00e-39	156.00
IUUC-Gmo-039226	Gadus morhua	37.28	1.00e-53	204.00
IUUC-Gac-041620	Gasterosteus aculeatus	30.22	5.00e-55	208.00
IUUC-Gma-043220	Glycine max	48.56	0.00e+00	780.00
IUUC-Mtr-057965	Medicago truncatula	46.80	0.00e+00	756.00
IUUC-Mdo-062300	Monodelphis domestica	30.68	1.00e-54	207.00
IUUC-Mac-065405	Musa acuminata	48.93	3.00e-158	551.00
IUUC-Ont-072128	Oreochromis niloticus	31.25	8.00e-58	218.00
IUUC-Stu-112158	Solanum tuberosum	93.24	0.00e+00	1501.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence