iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-013418

Ensembl Protein ID

ENSBTAP00000026387.5

UniProt Accession

Q3ZBQ4; SNR25_BOVIN

Genbank Protein ID

AAI03172.1

Protein Name

U11/U12 small nuclear ribonucleoprotein 25 kDa protein

Genbank Nucleotide ID

BC103171

Gene Name

SNRNP25

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000019804.5	ENSBTAT00000026387.5	ENSBTAP00000026387.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	4.20e-06	26.7	32	113

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgseltlkvnpsdtVaeLKeki..............ekk.lgippeqqrLiykGkiL.eddktLadyglkdgst 66
           ++v+v  +dg ++++ v   +tV++LK+ i              ++  +++ ++  +L+ +G+ L ed k+L dyg+++++ 
   Q: 32   MTVRVCKMDGEVMPVVVVQNATVLDLKKAIqryvqlrqereggiQHIsWSYVWRTYHLTSAGEKLtEDRKKLRDYGIRNRDE 113
           67888899******************************9999996667999989899999999999***********99886 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MVVQDPLLCD LPIQVTLEEV NSQIALEYGQ AMTVRVCKMD GEVMPVVVVQ NATVLDLKKA 60
IQRYVQLRQE REGGIQHISW SYVWRTYHLT SAGEKLTEDR KKLRDYGIRN RDEVSFIKKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCGATAGC CTCTGTCGCG TGGAGCCGCT GTGCGGGCGA AGCCGGCTGG AAACCCGGCG 60
CCCTGGAGGA GCCGCGGGTC GTGGCGCGGC CAGAGCCGCA GGACGACGAG GAGGATGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0507--mRNA processing
KW-0508--mRNA splicing
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0747--Spliceosome

Interpro

IPR029071--Ubiquitin-rel_dom

Gene Ontology

GO:0005829--C:cytosol
GO:0045171--C:intercellular bridge
GO:0005654--C:nucleoplasm
GO:0005689--C:U12-type spliceosomal complex
GO:0006397--P:mRNA processing
GO:0008380--P:RNA splicing

KEGG

bta:513526

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bci-013773	Botrytis cinerea	41.94	5.20e-02	31.60
IUUC-Cja-019542	Callithrix jacchus	98.37	2.00e-68	250.00
IUUC-Cpo-021791	Cavia porcellus	98.37	4.00e-69	253.00
IUUC-Cin-025440	Ciona intestinalis	60.66	2.00e-40	157.00
IUUC-Dre-028229	Danio rerio	78.05	1.00e-57	215.00
IUUC-Ete-032951	Echinops telfairi	25.00	5.50e+00	25.40
IUUC-Eca-033616	Equus caballus	100.00	1.00e-69	254.00
IUUC-Gac-041795	Gasterosteus aculeatus	76.23	8.00e-55	205.00
IUUC-Ggo-045439	Gorilla gorilla	98.37	2.00e-68	250.00
IUUC-Hsa-045948	Homo sapiens	98.37	2.00e-68	250.00
IUUC-Itr-048331	Ictidomys tridecemlineatus	99.19	4.00e-69	253.00
IUUC-Lch-050068	Latimeria chalumnae	81.30	1.00e-57	215.00
IUUC-Mcc-054809	Macaca mulatta	97.56	3.00e-68	249.00
IUUC-Mmu-063172	Mus musculus	98.37	7.00e-69	251.00
IUUC-Mac-065187	Musa acuminata	35.16	3.00e-09	55.10
IUUC-Ocu-074308	Oryctolagus cuniculus	97.56	5.00e-68	249.00
IUUC-Oga-089042	Otolemur garnettii	98.37	5.00e-69	253.00
IUUC-Oar-089400	Ovis aries	99.19	5.00e-69	252.00
IUUC-Ptr-091264	Pan troglodytes	98.37	2.00e-68	250.00
IUUC-Pan-092931	Papio anubis	97.56	3.00e-68	249.00
IUUC-Pfo-097322	Poecilia formosa	77.05	8.00e-55	206.00
IUUC-Pab-098273	Pongo abelii	98.37	2.00e-68	250.00
IUUC-Rno-105525	Rattus norvegicus	98.37	7.00e-69	251.00
IUUC-Ssl-108605	Sclerotinia sclerotiorum	45.16	9.00e-03	33.90
IUUC-Sly-110960	Solanum lycopersicum	33.33	9.00e-11	60.10
IUUC-Stu-112094	Solanum tuberosum	30.34	1.00e-08	53.50
IUUC-Ssc-115263	Sus scrofa	96.75	2.00e-67	247.00
IUUC-Tru-117994	Takifugu rubripes	76.23	1.00e-53	201.00
IUUC-Tni-120742	Tetraodon nigroviridis	77.87	2.00e-55	207.00
IUUC-Xtr-132218	Xenopus tropicalis	81.30	2.00e-59	221.00
IUUC-Xma-133570	Xiphophorus maculatus	76.23	2.00e-54	204.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence