iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043667

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000851

Gene Name

LOC100816238; GLYMA_18G060500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA18G06760	GLYMA18G06760.1	GLYMA18G06760.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.10e-06	28.1	133	175

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+ f   +   ++lp CgH fh +C+ +w       s + +CP+Cr
   Q: 133  CVICLSAFvsgE-VGRCLPkCGHGFHVECIDMW------LSSHSNCPICR 175
           ********7742.3445666*************......**********8 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSIQPDSPNN NTLTQMFQNI FSDNSNIMLA AIISLLLVIL FVLLLHLYAK LFLAQAQPQA 60
HARRRRRRRR RNTVTVSDVL GPARFHHFHS FNIEDSSPLT TKGLDSSTIR TIPLFIYEPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCTCATAA AGAAAACAAC TCCACCAAGA TTGTGAACCA CCACCCTCCT AATAAAACCC 60
ATCAAGTCCA AACCTTTGAG CCAAAACCAA ACACCCTTTT GGCCACACTC TTCAGTCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005769--C:early endosome
GO:0005798--C:Golgi-associated vesicle
GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0071470--P:cellular response to osmotic stress
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0030100--P:regulation of endocytosis
GO:1901000--P:regulation of response to salt stress

KEGG

gmx:100816238

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005886	Arabidopsis lyrata	63.95	6.00e-22	98.20
IUUC-Ath-007163	Arabidopsis thaliana	58.76	6.00e-23	101.00
IUUC-Bta-012597	Bos taurus	36.56	6.00e-15	75.90
IUUC-Bol-016543	Brassica oleracea	64.71	3.00e-21	95.50
IUUC-Bra-016698	Brassica rapa	60.71	4.00e-22	98.60
IUUC-Mtr-058692	Medicago truncatula	68.70	4.00e-60	224.00
IUUC-Pop-099382	Populus trichocarpa	54.70	1.00e-36	146.00
IUUC-Ppe-101809	Prunus persica	44.61	1.00e-36	146.00
IUUC-Sly-111499	Solanum lycopersicum	51.72	5.00e-26	110.00
IUUC-Stu-112903	Solanum tuberosum	57.58	3.00e-25	107.00
IUUC-Tca-121048	Theobroma cacao	53.76	4.00e-31	127.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence