iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113993

Ensembl Protein ID

Sb03g035720.1

UniProt Accession

C5XKY6; C5XKY6_SORBI

Genbank Protein ID

EES01524.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G308700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g035720	Sb03g035720.1	Sb03g035720.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	5.90e-09	37.0	90	173

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 8    ggeeffahkivLaasSsvFyalflmelees...................ksklmveikd......vqpevfrallkFlYtgklde 67
           gg  ++ h+++Laa+S++Fy+lf    + +                     ++++++++      v  e+f+a+l ++Ytgkl+ 
   Q: 90   GGPPVPIHRCILAARSDFFYDLFAARGRGGalrgdatagaggaaegaasG-RPRYKMEElvpggrVGREAFQAFLGYMYTGKLRP 173
           5778999****************7777766789999************63.78888885556689*****************975 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEPSSSITFA SSSSYLSNGS SPCSVAMPPP GPPQAPPLAG GEGWGGGVAT AGSGSSVEAV 60
SLNRLSKNLE RLLLDRDLDC SDADVEVPDG GPPVPIHRCI LAARSDFFYD LFAARGRGGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCCGTCGAC GCACCAAACA ATCTCTCACG TCCTTGCTCC CCGCCGCTAC TGGAATATGC 60
TGCCGACTTG GATCCGTTCT CTACTTGTCT GAGATTTAGC CGCCGCCGGC CCGGTAGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0040--ANK repeat
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002110--Ankyrin_rpt
IPR020683--Ankyrin_rpt-contain_dom
IPR000210--BTB/POZ_dom
IPR021094--NPR1/NIM1-like_C
IPR011333--SKP1/BTB/POZ

PROSITE

PS50297--ANK_REP_REGION
PS50088--ANK_REPEAT
PS50097--BTB

Pfam

PF12796--Ank_2
PF00651--BTB
PF12313--NPR1_like_C

SMART

SM00248--ANK
SM00225--BTB

Gene Ontology

GO:0005737--C:cytoplasm
GO:0019005--C:SCF ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030162--P:regulation of proteolysis

KEGG

sbi:SORBI_03g035720

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001052	Aegilops tauschii	54.30	4.00e-138	484.00
IUUC-Atr-003091	Amborella trichopoda	53.87	2.00e-151	528.00
IUUC-Aly-005725	Arabidopsis lyrata	51.64	4.00e-146	510.00
IUUC-Ath-006582	Arabidopsis thaliana	52.98	6.00e-150	523.00
IUUC-Bdi-014820	Brachypodium distachyon	79.08	0.00e+00	753.00
IUUC-Bol-016216	Brassica oleracea	53.07	4.00e-154	537.00
IUUC-Bra-017463	Brassica rapa	54.33	2.00e-155	541.00
IUUC-Gma-042735	Glycine max	62.48	0.00e+00	649.00
IUUC-Hvu-047716	Hordeum vulgare	53.49	1.00e-140	492.00
IUUC-Lpe-051281	Leersia perrieri	81.25	0.00e+00	783.00
IUUC-Mtr-058654	Medicago truncatula	62.39	0.00e+00	632.00
IUUC-Mla-058991	Melampsora laricipopulina	27.50	4.30e+00	25.40
IUUC-Mac-065548	Musa acuminata	67.45	0.00e+00	660.00
IUUC-Oba-075074	Oryza barthii	81.41	0.00e+00	755.00
IUUC-Obr-076350	Oryza brachyantha	84.76	0.00e+00	671.00
IUUC-Ogl-077930	Oryza glaberrima	83.27	0.00e+00	784.00
IUUC-Ogu-078387	Oryza glumaepatula	83.15	0.00e+00	799.00
IUUC-Oin-079463	Oryza indica	82.90	0.00e+00	764.00
IUUC-Olo-080981	Oryza longistaminata	85.93	0.00e+00	642.00
IUUC-Ome-081437	Oryza meridionalis	84.01	0.00e+00	814.00
IUUC-Oni-082237	Oryza nivara	83.15	0.00e+00	799.00
IUUC-Opu-083712	Oryza punctata	79.42	0.00e+00	739.00
IUUC-Oru-084496	Oryza rufipogon	83.09	0.00e+00	787.00
IUUC-Osa-086262	Oryza sativa	83.09	0.00e+00	787.00
IUUC-Ppa-095278	Physcomitrella patens	36.58	1.00e-73	269.00
IUUC-Pop-099287	Populus trichocarpa	62.91	0.00e+00	659.00
IUUC-Ppe-101336	Prunus persica	61.58	0.00e+00	625.00
IUUC-Pyt-104593	Pyrenophora triticirepentis	30.99	9.10e+00	24.30
IUUC-Sit-109849	Setaria italica	87.20	0.00e+00	851.00
IUUC-Sly-111652	Solanum lycopersicum	57.04	4.00e-158	550.00
IUUC-Stu-112546	Solanum tuberosum	57.04	5.00e-158	550.00
IUUC-Tca-121013	Theobroma cacao	62.41	0.00e+00	627.00
IUUC-Tae-125381	Triticum aestivum	80.23	0.00e+00	808.00
IUUC-Vvi-130962	Vitis vinifera	62.57	0.00e+00	642.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence