iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058030

Ensembl Protein ID

KEH35044

UniProt Accession

A0A072UZ19; A0A072UZ19_MEDTR

Genbank Protein ID

KEH35044.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g078120

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g078120	KEH35044	KEH35044

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.60e-06	27.8	85	127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cle+f   d  ++lp C H fh +C+  w        k+  CP+Cr
   Q: 85   CAVCLESFkvGDACRLLPnCRHSFHVQCIDLW------ILKTPFCPICR 127
           ********88444999999*************......777777****8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MVMEIVISLI ILFVGIAILV SIHFCIVGRA FRRDSNNEDM QVQSSSTRST AKGMFGGDNI 60
GDLKNLPCFD YVEQPEKGNN NLVDCAVCLE SFKVGDACRL LPNCRHSFHV QCIDLWILKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTTTCAGCT TTCTGGGTCA TTTTCTAATT AAAAATAATA ATTAAACATA AATAAGTGAC 60
AATGAATGCA GCCAGGTAGC TTGCCGTAGC TATAATCTGT GATTGAGCCT CTATATTGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_3g078120

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043176	Glycine max	66.22	5.00e-52	195.00
IUUC-Hvu-047516	Hordeum vulgare	31.01	7.00e-19	85.50
IUUC-Lpe-050839	Leersia perrieri	41.18	2.00e-17	80.50
IUUC-Ppe-102044	Prunus persica	56.25	9.00e-34	135.00
IUUC-Sly-111913	Solanum lycopersicum	49.30	1.00e-32	131.00
IUUC-Stu-112550	Solanum tuberosum	49.66	1.00e-33	134.00
IUUC-Tae-123944	Triticum aestivum	30.23	7.00e-20	89.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence