iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111247

Ensembl Protein ID

Solyc01g099400.2.1

UniProt Accession

K4B0X7; K4B0X7_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g099400.2	Solyc01g099400.2.1	Solyc01g099400.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-08	35.2	137	175

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgt.ikvWDlrtgvllk 37
           H +++ c+a+ +d +ll+++s  gt ++++++ +g l++
   Q: 137  HDSRIVCFALtNDgRLLATSSSKGTlVRIYNTLDGSLVQ 175
           99*********999*****************99998876 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MSTSKAKRNL LPVKFLLPYT CTPYLSSIIS FSSSSILFSH RLSFSLYAAT RNSSAICRRS 60
PPYLMTSTIS ASSPWPEGPF VSPPMSENSP DSVANPKGLC EVSQVSGSMV LVCPGLQKGQ 120

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Nucleotide Sequence
(Fasta)

ATGTCTACAA GTAAAGCTAA ACGGAACCTT CTGCCTGTAA AATTTCTTCT ACCTTACACT 60
TGCACCCCCT ATCTTTCTTC AATTATTTCA TTCTCATCCT CTTCAATTCT CTTCTCTCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence