iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080271

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN539352.1_FG006	KN539352.1_FGT006	KN539352.1_FGP006

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-28	98.0	428	461
UBD/Beta-Prp	2.70e-43	148.9	332	598

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlr 31
           H++ v+++af  ++  l +v+++dD  ikvWD++
   Q: 428  HSGAVNDIAFsrPNkQLcVVTCGDDRLIKVWDMH 461
           9**********9774334799***********75 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp...sgdklvsGshdr..tirv..wdletgqc 128
           +++  ++ + vt+++f+p++  +l+ gs+ + i +w++  ++ +  ++ + +++++++ +    + +++vsG +     i++  ++ ++++ 
   Q: 332  VACTLSQGSSVTSMDFHPTRHtLLLVGSTNGEITLWEVGMRERL--FS-KPFKIWDIQACSpqfQVSFVVSGVAFAkhLIHLhaYQQPNETR 420
           44444455589999999999889999999999999999877754..34.6788888888877656699999986541156667766555554 PP
   S: 129  leetlsghdgvvncvvvhpdg..nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng..kelvsgsldgtvklwdlqtgecvr 216
                + h+g+vn ++++  +   ++v++++Dr +++Wd+  g+ l  ++g h+ +vys+  +++   +++ s sldg++k w + +    +
   Q: 421  QVLEIDAHSGAVNDIAFSRPNkqLCVVTCGDDRLIKVWDM-HGQKLFSFEG-HEAPVYSICPHHKEsiQFIFSTSLDGKIKAWLYDHMGSRV 510
           443467788888877776555456789*************.888999***9.********95444448******************9999** PP
   S: 217  tlnghtdnvksvrfspnderlvsgs..sDgsiri..Wdlrsgdllktlqlhnssvisvavlsfg..dnvlvlgsedskvniwklkkne 298
            + +  ++ + +  s +++rl s++  +Dg  ++  W+   g + +t+++ ++++  v v++f+  +n++++++ed+++++w++++++
   Q: 511  DYDAPGKWCTTMLYSADGTRLFSCGtsKDGDSYLveWNESEGSIKRTYSGFRKKSAGVGVVQFDtaQNHILAAGEDNQIKFWDVDNTT 598
           ***********************9888777666667*******************99999777766*****************99865 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEEKVHAGEW DEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDRHDR AKAVDILVKD LKVFSTFNEE LYKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCGC TCAGCCGGGA GCTCGTGTTC CTCATCCTCC AGTTCCTCGA CGAGGAGAAG 60
TTCAAGGAGA CCGTGCACAA GTGCGTAGCC CTTTCTCCGT CCCTTGCCTC TCTCGCTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000072	Aegilops tauschii	79.47	0.00e+00	1723.00
IUUC-Aly-006246	Arabidopsis lyrata	69.35	0.00e+00	1569.00
IUUC-Ath-006901	Arabidopsis thaliana	69.90	0.00e+00	1566.00
IUUC-Bdi-014677	Brachypodium distachyon	86.05	0.00e+00	1941.00
IUUC-Bol-016487	Brassica oleracea	67.86	0.00e+00	1502.00
IUUC-Bra-016798	Brassica rapa	67.51	0.00e+00	1493.00
IUUC-Gma-042940	Glycine max	72.28	0.00e+00	1660.00
IUUC-Hvu-047370	Hordeum vulgare	85.61	0.00e+00	1979.00
IUUC-Lpe-050951	Leersia perrieri	91.58	0.00e+00	2005.00
IUUC-Mtr-058168	Medicago truncatula	72.48	0.00e+00	1669.00
IUUC-Mac-064660	Musa acuminata	74.41	0.00e+00	1657.00
IUUC-Oba-075415	Oryza barthii	97.79	0.00e+00	2210.00
IUUC-Obr-076726	Oryza brachyantha	92.84	0.00e+00	2127.00
IUUC-Ogl-077810	Oryza glaberrima	97.79	0.00e+00	2210.00
IUUC-Ogu-078090	Oryza glumaepatula	97.79	0.00e+00	2210.00
IUUC-Oin-080158	Oryza indica	96.63	0.00e+00	2177.00
IUUC-Ome-081965	Oryza meridionalis	97.34	0.00e+00	2198.00
IUUC-Oni-082421	Oryza nivara	97.61	0.00e+00	2207.00
IUUC-Opu-083912	Oryza punctata	96.90	0.00e+00	2194.00
IUUC-Oru-085201	Oryza rufipogon	97.79	0.00e+00	2210.00
IUUC-Osa-086161	Oryza sativa	97.79	0.00e+00	2210.00
IUUC-Pop-099188	Populus trichocarpa	71.48	0.00e+00	1625.00
IUUC-Ppe-102061	Prunus persica	70.73	0.00e+00	1628.00
IUUC-Sit-110487	Setaria italica	88.16	0.00e+00	2008.00
IUUC-Sly-111169	Solanum lycopersicum	71.93	0.00e+00	1657.00
IUUC-Stu-112369	Solanum tuberosum	71.75	0.00e+00	1654.00
IUUC-Sbi-113873	Sorghum bicolor	87.81	0.00e+00	2006.00
IUUC-Tca-121579	Theobroma cacao	71.30	0.00e+00	1563.00
IUUC-Tae-125707	Triticum aestivum	85.68	0.00e+00	1959.00
IUUC-Tur-126477	Triticum urartu	80.98	0.00e+00	1926.00
IUUC-Vvi-131297	Vitis vinifera	73.44	0.00e+00	1672.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence