iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppe-101141

Ensembl Protein ID

EMJ26665

UniProt Accession

M5Y4C4; M5Y4C4_PRUPE

Genbank Protein ID

EMJ26665.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KB638913

Gene Name

PRUPE_ppa000216mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PRUPE_ppa000216mg	EMJ26665	EMJ26665

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-13	48.7	1209	1238
E3 activity/RING/U-box	4.00e-26	91.4	471	544

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           Ht  vtcl   s+ + l sGs D+ti+vW 
   Q: 1209 HTKAVTCLYIsSSgDKLYSGSLDKTIRVWA 1238
           999*****889556***************7 PP

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl..vPnltlrrliqawceens 73
           +p++f+CpI++++++dPv+l++G+ty+r++I++wl++g++tcP+trqp++ ++   + n++l+rl  +w e++ 
   Q: 471  PPKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPIAATTTlpKTNYVLKRLMTSWKEQHP 544
           699**********************************************5555426779************996 PP

Organism

Prunus persica

Protein Sequence
(Fasta)

MAANYRFAMD QKDIVRVLIT TVDGFIRDQL INKEQRAQHR EQCAERLAAE DGSCGRETEV 60
RYSDQAVLAN LDWGIEALEE AIDTSNMETK LARLDHAEKM LQVCAMLNSD QKTAGVPNFY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGCAA ACTATAGATT TGCAATGGAC CAAAAGGATA TTGTTAGGGT ATTAATTACC 60
ACAGTGGATG GTTTTATACG GGATCAGCTG ATCAACAAAG AGCAGAGAGC CCAACATAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pper:PRUPE_ppa000216mg

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ani-009184	Aspergillus nidulans	23.81	1.00e-08	54.70
IUUC-Gma-042764	Glycine max	67.66	0.00e+00	1479.00
IUUC-Mtr-057843	Medicago truncatula	66.51	0.00e+00	1926.00
IUUC-Pop-099454	Populus trichocarpa	68.86	0.00e+00	2038.00
IUUC-Smo-109666	Selaginella moellendorffii	38.31	1.00e-167	583.00
IUUC-Sly-111208	Solanum lycopersicum	62.74	0.00e+00	1816.00
IUUC-Stu-112377	Solanum tuberosum	60.54	0.00e+00	1766.00
IUUC-Tca-121527	Theobroma cacao	70.03	0.00e+00	2077.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence