iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017152

Ensembl Protein ID

Bra011518.1-P

UniProt Accession

M4D4W1; M4D4W1_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra011518	Bra011518.1	Bra011518.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.80e-13	48.8	546	581

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgv 34
           H++ ++ ++f  ++  +++++s D+ +k+WDlr+++
   Q: 546  HQEHINVVKFsnHSpSIFATSSFDKDVKLWDLRQDP 581
           788899999*96334789**************9986 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAMLTEIATL EEKYIEICKK HGTVPNTSIL SAFFEAEDKK SRNQRCIMNI LVDRVMYDDF 60
HPILELCNEI NASEVEGIDL SVRSSCSLED QYVLSLIRSV DQKLRLVDVH DCFGTTFWRD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTATGC TCACTGAAAT CGCCACCCTT GAGGAGAAGT ATGTTTTGAT TTTATTTTTA 60
TTTCTCAACT TTTTGTTTGT GTCTGATCTT TTGAATTAAG ACAGAAAAAA GTTGACATGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR003603--U2A'_phosphoprotein32A_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00446--LRRcap
SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0071493--P:cellular response to UV-B

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005966	Arabidopsis lyrata	76.21	0.00e+00	1127.00
IUUC-Ath-007257	Arabidopsis thaliana	76.02	0.00e+00	1121.00
IUUC-Bol-016080	Brassica oleracea	96.12	0.00e+00	1479.00
IUUC-Cme-027163	Cyanidioschyzon merolae	33.27	3.00e-69	256.00
IUUC-Gma-044343	Glycine max	53.40	0.00e+00	785.00
IUUC-Mtr-057634	Medicago truncatula	53.83	0.00e+00	801.00
IUUC-Mac-065375	Musa acuminata	46.89	0.00e+00	675.00
IUUC-Ppa-095407	Physcomitrella patens	51.21	4.00e-143	502.00
IUUC-Pop-099267	Populus trichocarpa	56.84	0.00e+00	810.00
IUUC-Ppe-101596	Prunus persica	57.98	0.00e+00	792.00
IUUC-Smo-108795	Selaginella moellendorffii	52.20	2.00e-126	446.00
IUUC-Sly-111655	Solanum lycopersicum	63.22	0.00e+00	629.00
IUUC-Stu-111974	Solanum tuberosum	68.94	2.00e-178	619.00
IUUC-Tca-121812	Theobroma cacao	57.06	0.00e+00	856.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence