iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-022063

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02046859

Gene Name

DDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000013358.3	ENSCPOT00000013488.2	ENSCPOP00000012024.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-10	39.6	250	272

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclafsdtllvsGsdDgtikvWDlrt 32
            c++   +ll+++s D t+k+WDlr+
   Q: 250  PCCD---WLLATASVDQTVKLWDLRQ 272
           3445...5***************986 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MIPRKRPETQ KTPKVVVRPG SRRSPLEPEP AAKKPRTRGP GPGRRYDSGC VQAGLASLQV 60
PKVGSNIVRV LHQHKLGVAA WPSLQQGLQQ SFVHSLTAYR ISQKASPFDR RATALAWHPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTCCCA GGAAGCGCCC AGAAACCCAG AAGACCCCCA AAGTGGTGGT GCGCCCAGGG 60
AGCAGGAGAA GTCCCCTGGA GCCGGAGCCC GCGGCCAAGA AGCCCCGCAC GAGGGGCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030054--C:cell junction
GO:0031465--C:Cul4B-RING E3 ubiquitin ligase complex
GO:0005654--C:nucleoplasm
GO:0043234--C:protein complex
GO:0003684--F:damaged DNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0035518--P:histone H2A monoubiquitination
GO:0051865--P:protein autoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0006290--P:pyrimidine dimer repair
GO:0070914--P:UV-damage excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	29.32	5.00e-30	125.00
IUUC-Aml-002203	Ailuropoda melanoleuca	79.48	0.00e+00	697.00
IUUC-Atr-002957	Amborella trichopoda	30.63	2.00e-34	140.00
IUUC-Apl-003832	Anas platyrhynchos	55.15	1.00e-123	436.00
IUUC-Aca-004358	Anolis carolinensis	53.79	1.00e-125	443.00
IUUC-Aly-006296	Arabidopsis lyrata	30.77	2.00e-33	137.00
IUUC-Ath-007115	Arabidopsis thaliana	30.46	3.00e-34	139.00
IUUC-Ame-010817	Astyanax mexicanus	54.37	1.00e-120	426.00
IUUC-Bta-012914	Bos taurus	79.48	0.00e+00	711.00
IUUC-Bdi-014261	Brachypodium distachyon	30.00	1.00e-30	127.00
IUUC-Bol-015317	Brassica oleracea	30.98	3.00e-34	139.00
IUUC-Bra-016848	Brassica rapa	30.98	2.00e-34	140.00
IUUC-Cja-018967	Callithrix jacchus	78.96	0.00e+00	692.00
IUUC-Cfa-021238	Canis familiaris	79.43	0.00e+00	676.00
IUUC-Csa-023382	Chlorocebus sabaeus	79.20	0.00e+00	712.00
IUUC-Cho-024805	Choloepus hoffmanni	53.40	6.00e-82	296.00
IUUC-Dre-028732	Danio rerio	50.00	3.00e-109	388.00
IUUC-Dor-030461	Dipodomys ordii	60.05	9.00e-139	486.00
IUUC-Ete-033038	Echinops telfairi	68.40	3.00e-173	600.00
IUUC-Eca-033772	Equus caballus	79.01	0.00e+00	668.00
IUUC-Eeu-034662	Erinaceus europaeus	55.00	3.00e-57	215.00
IUUC-Fca-036095	Felis catus	80.05	0.00e+00	692.00
IUUC-Gmo-039683	Gadus morhua	50.97	3.00e-106	378.00
IUUC-Gga-040530	Gallus gallus	56.13	3.00e-125	441.00
IUUC-Gac-041517	Gasterosteus aculeatus	51.64	2.00e-102	365.00
IUUC-Gma-043378	Glycine max	30.40	5.00e-35	142.00
IUUC-Ggo-045364	Gorilla gorilla	79.91	0.00e+00	717.00
IUUC-Hsa-046354	Homo sapiens	79.67	0.00e+00	716.00
IUUC-Hvu-047151	Hordeum vulgare	31.02	3.00e-28	119.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	81.53	0.00e+00	734.00
IUUC-Lpe-051256	Leersia perrieri	29.91	8.00e-30	125.00
IUUC-Loc-052398	Lepisosteus oculatus	50.35	2.00e-122	432.00
IUUC-Laf-053562	Loxodonta africana	76.42	0.00e+00	658.00
IUUC-Mcc-055197	Macaca mulatta	61.94	2.00e-147	514.00
IUUC-Meu-056151	Macropus eugenii	71.96	5.00e-115	406.00
IUUC-Mtr-057940	Medicago truncatula	29.39	2.00e-32	133.00
IUUC-Mga-059923	Meleagris gallopavo	53.05	1.00e-131	462.00
IUUC-Mmr-061465	Microcebus murinus	83.64	1.00e-144	505.00
IUUC-Mdo-063063	Monodelphis domestica	65.69	1.00e-153	535.00
IUUC-Mmu-064294	Mus musculus	75.00	0.00e+00	662.00
IUUC-Mac-065598	Musa acuminata	31.17	5.00e-33	135.00
IUUC-Mpu-066831	Mustela putorius furo	80.19	0.00e+00	702.00
IUUC-Mlu-067222	Myotis lucifugus	78.07	0.00e+00	694.00
IUUC-Nle-069581	Nomascus leucogenys	79.43	0.00e+00	712.00
IUUC-Opr-070644	Ochotona princeps	77.30	0.00e+00	681.00
IUUC-Ont-072605	Oreochromis niloticus	54.03	9.00e-115	407.00
IUUC-Oan-072973	Ornithorhynchus anatinus	68.34	1.00e-144	505.00
IUUC-Ocu-074615	Oryctolagus cuniculus	79.25	0.00e+00	714.00
IUUC-Oba-075283	Oryza barthii	29.32	8.00e-30	125.00
IUUC-Obr-076605	Oryza brachyantha	29.75	2.00e-31	130.00
IUUC-Ogl-077512	Oryza glaberrima	29.32	1.00e-29	124.00
IUUC-Ogu-078329	Oryza glumaepatula	29.32	8.00e-30	125.00
IUUC-Oin-079980	Oryza indica	29.32	1.00e-29	124.00
IUUC-Olo-080516	Oryza longistaminata	29.32	1.00e-29	124.00
IUUC-Ome-081415	Oryza meridionalis	29.32	1.00e-29	124.00
IUUC-Oni-082985	Oryza nivara	29.32	1.00e-29	124.00
IUUC-Opu-084159	Oryza punctata	29.63	3.00e-30	126.00
IUUC-Oru-085137	Oryza rufipogon	29.32	6.00e-30	125.00
IUUC-Osa-085614	Oryza sativa	29.32	6.00e-30	125.00
IUUC-Ola-087044	Oryzias latipes	49.59	2.00e-107	382.00
IUUC-Oga-088274	Otolemur garnettii	77.36	0.00e+00	686.00
IUUC-Oar-089826	Ovis aries	79.72	0.00e+00	719.00
IUUC-Ptr-091631	Pan troglodytes	79.67	0.00e+00	716.00
IUUC-Pan-092535	Papio anubis	79.43	0.00e+00	715.00
IUUC-Psi-093815	Pelodiscus sinensis	55.75	2.00e-122	432.00
IUUC-Pma-094474	Petromyzon marinus	49.85	2.00e-99	355.00
IUUC-Ppa-095414	Physcomitrella patens	28.09	3.00e-26	113.00
IUUC-Pfo-096559	Poecilia formosa	47.94	2.00e-104	372.00
IUUC-Pab-098528	Pongo abelii	79.91	0.00e+00	714.00
IUUC-Pop-100064	Populus trichocarpa	30.03	1.00e-34	140.00
IUUC-Pca-100803	Procavia capensis	74.76	0.00e+00	652.00
IUUC-Ppe-101966	Prunus persica	30.72	7.00e-35	141.00
IUUC-Pva-103213	Pteropus vampyrus	78.54	0.00e+00	660.00
IUUC-Rno-105087	Rattus norvegicus	75.24	0.00e+00	674.00
IUUC-Sha-107466	Sarcophilus harrisii	67.23	6.00e-146	510.00
IUUC-Sit-109968	Setaria italica	29.32	3.00e-29	123.00
IUUC-Sly-111495	Solanum lycopersicum	29.79	4.00e-32	132.00
IUUC-Stu-111974	Solanum tuberosum	25.40	6.00e-13	69.30
IUUC-Sar-113272	Sorex araneus	74.70	7.00e-157	546.00
IUUC-Sbi-114706	Sorghum bicolor	27.64	7.00e-26	112.00
IUUC-Ssc-115437	Sus scrofa	78.77	0.00e+00	694.00
IUUC-Tgu-116602	Taeniopygia guttata	58.40	2.00e-120	426.00
IUUC-Tru-118698	Takifugu rubripes	51.81	4.00e-99	354.00
IUUC-Tsy-119027	Tarsius syrichta	75.79	3.00e-177	613.00
IUUC-Tni-119787	Tetraodon nigroviridis	50.69	4.00e-104	371.00
IUUC-Tca-121447	Theobroma cacao	30.06	7.00e-35	141.00
IUUC-Tae-125839	Triticum aestivum	29.63	2.00e-30	126.00
IUUC-Tur-126724	Triticum urartu	29.63	2.00e-30	127.00
IUUC-Tbe-127680	Tupaia belangeri	61.74	8.00e-134	469.00
IUUC-Ttr-128201	Tursiops truncatus	70.05	3.00e-170	590.00
IUUC-Vpa-130451	Vicugna pacos	65.93	2.00e-99	355.00
IUUC-Vvi-131001	Vitis vinifera	29.13	6.00e-34	138.00
IUUC-Xtr-132266	Xenopus tropicalis	55.88	1.00e-127	449.00
IUUC-Xma-133034	Xiphophorus maculatus	50.12	1.00e-114	406.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence