iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093129

Ensembl Protein ID

ENSPSIP00000004741.1

UniProt Accession

K7F9N1; K7F9N1_PELSI

Genbank Protein ID

ENSPSIP00000004741

Protein Name

Eukaryotic translation initiation factor 3 subunit F; Eukaryotic translation initiation factor 3 subunit 5

Genbank Nucleotide ID

AGCU01171198

Gene Name

EIF3F; EIF3S5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000004432.1	ENSPSIT00000004768.1	ENSPSIP00000004741.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	85.71	6.00e-129	457.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pelodiscus sinensis

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

PAPSPLPPLA PCSLSQNPLA PLPSIVPRAP ALAPPPALPG PSPAPAPNPP PKPVKMSKGA 60
RVGSVSDGRK GRPGTFLRLI LCSAGTVDKH SVEVTNCFSV PHNESEDEVA VDMEFAKNMY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTGCCCCCT CTCCCCTGCC CCCACTGGCA CCCTGTTCCC TGTCCCAGAA CCCACTAGCA 60
CCCCTCCCCA GTATTGTGTC CCCTGCTCCC AAAGGACTTT TCTATGCGTC AGTGACCCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0016020--C:membrane
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0075522--P:IRES-dependent viral translational initiation
GO:0016579--P:protein deubiquitination
GO:0006446--P:regulation of translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	35.13	2.00e-41	162.00
IUUC-Aml-001527	Ailuropoda melanoleuca	85.71	8.00e-131	459.00
IUUC-Atr-002686	Amborella trichopoda	39.75	1.00e-41	162.00
IUUC-Apl-003977	Anas platyrhynchos	95.98	2.00e-128	451.00
IUUC-Aca-004335	Anolis carolinensis	86.49	2.00e-132	464.00
IUUC-Aly-005945	Arabidopsis lyrata	36.47	3.00e-43	168.00
IUUC-Ath-007045	Arabidopsis thaliana	36.08	4.00e-42	164.00
IUUC-Acl-008365	Aspergillus clavatus	32.77	2.00e-36	145.00
IUUC-Afl-008742	Aspergillus flavus	33.61	4.00e-35	141.00
IUUC-Afu-009030	Aspergillus fumigatus	33.19	4.00e-37	148.00
IUUC-Ani-009212	Aspergillus nidulans	33.61	8.00e-37	147.00
IUUC-Ang-009712	Aspergillus niger	32.35	2.00e-35	142.00
IUUC-Aor-009885	Aspergillus oryzae	33.61	5.00e-37	147.00
IUUC-Ate-010315	Aspergillus terreus	33.61	2.00e-35	142.00
IUUC-Ame-010801	Astyanax mexicanus	47.31	3.00e-54	204.00
IUUC-Bgr-011982	Blumeria graminis	35.02	3.00e-38	152.00
IUUC-Bta-012804	Bos taurus	86.10	1.00e-130	459.00
IUUC-Bci-013891	Botrytis cinerea	35.44	3.00e-34	138.00
IUUC-Bdi-014328	Brachypodium distachyon	37.07	1.00e-42	166.00
IUUC-Bol-015446	Brassica oleracea	35.29	8.00e-43	166.00
IUUC-Bra-016862	Brassica rapa	35.69	2.00e-43	169.00
IUUC-Cel-018171	Caenorhabditis elegans	35.06	6.00e-40	157.00
IUUC-Cja-019335	Callithrix jacchus	85.71	2.00e-130	458.00
IUUC-Cfa-020138	Canis familiaris	85.33	3.00e-130	457.00
IUUC-Cpo-022109	Cavia porcellus	74.81	1.00e-109	389.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	37.55	1.00e-49	189.00
IUUC-Csa-023994	Chlorocebus sabaeus	85.71	2.00e-130	458.00
IUUC-Cho-024351	Choloepus hoffmanni	75.94	1.00e-88	319.00
IUUC-Cin-025801	Ciona intestinalis	50.55	3.00e-77	281.00
IUUC-Csv-025805	Ciona savignyi	49.08	9.00e-74	269.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	32.07	9.00e-34	137.00
IUUC-Cne-026868	Cryptococcus neoformans	30.64	2.00e-26	112.00
IUUC-Cme-027328	Cyanidioschyzon merolae	27.61	1.00e-20	93.20
IUUC-Dre-028085	Danio rerio	73.75	8.00e-114	402.00
IUUC-Dno-030099	Dasypus novemcinctus	85.33	3.00e-130	457.00
IUUC-Dor-030324	Dipodomys ordii	91.04	2.00e-114	404.00
IUUC-Dse-031314	Dothistroma septosporum	33.96	6.00e-41	160.00
IUUC-Dme-031926	Drosophila melanogaster	46.15	1.00e-66	245.00
IUUC-Ete-032569	Echinops telfairi	83.95	4.00e-118	417.00
IUUC-Eca-033502	Equus caballus	80.69	1.00e-119	422.00
IUUC-Eeu-034883	Erinaceus europaeus	75.14	3.00e-75	273.00
IUUC-Fca-035873	Felis catus	85.71	9.00e-131	459.00
IUUC-Fal-036921	Ficedula albicollis	89.96	2.00e-137	481.00
IUUC-Fox-037765	Fusarium oxysporum	32.56	9.00e-29	120.00
IUUC-Fso-038240	Fusarium solani	33.33	2.00e-31	129.00
IUUC-Gmo-038864	Gadus morhua	74.90	2.00e-117	414.00
IUUC-Ggr-039862	Gaeumannomyces graminis	29.73	3.00e-27	115.00
IUUC-Gga-040952	Gallus gallus	89.96	8.00e-137	479.00
IUUC-Gac-041677	Gasterosteus aculeatus	75.68	3.00e-117	414.00
IUUC-Gma-043061	Glycine max	38.87	2.00e-41	162.00
IUUC-Ggo-045591	Gorilla gorilla	85.71	9.00e-131	459.00
IUUC-Hsa-046860	Homo sapiens	85.71	2.00e-130	458.00
IUUC-Hvu-047410	Hordeum vulgare	31.08	3.00e-21	94.00
IUUC-Itr-048211	Ictidomys tridecemlineatus	85.71	8.00e-131	459.00
IUUC-Lch-049410	Latimeria chalumnae	66.33	4.00e-72	263.00
IUUC-Lpe-051102	Leersia perrieri	36.47	4.00e-43	167.00
IUUC-Loc-052016	Lepisosteus oculatus	69.11	3.00e-103	367.00
IUUC-Lma-053157	Leptosphaeria maculans	33.58	6.00e-40	157.00
IUUC-Laf-054568	Loxodonta africana	85.33	5.00e-130	456.00
IUUC-Mcc-054613	Macaca mulatta	85.71	1.00e-130	459.00
IUUC-Meu-056832	Macropus eugenii	71.43	7.00e-82	295.00
IUUC-Mor-057104	Magnaporthe oryzae	30.45	4.00e-28	118.00
IUUC-Mtr-058445	Medicago truncatula	37.74	3.00e-50	191.00
IUUC-Mla-059038	Melampsora laricipopulina	27.60	1.00e-25	110.00
IUUC-Mga-059548	Meleagris gallopavo	96.61	3.00e-136	476.00
IUUC-Mvi-060520	Microbotryum violaceum	24.81	3.00e-17	82.00
IUUC-Mdo-062376	Monodelphis domestica	86.49	1.00e-132	465.00
IUUC-Mmu-063254	Mus musculus	84.94	2.00e-129	454.00
IUUC-Mac-065635	Musa acuminata	37.83	3.00e-48	184.00
IUUC-Mpu-066314	Mustela putorius furo	85.71	1.00e-130	459.00
IUUC-Mlu-067512	Myotis lucifugus	85.33	9.00e-130	456.00
IUUC-Nfi-068262	Neosartorya fischeri	33.19	4.00e-37	148.00
IUUC-Ncr-068872	Neurospora crassa	32.17	3.00e-31	129.00
IUUC-Nle-070118	Nomascus leucogenys	85.71	9.00e-131	459.00
IUUC-Opr-071228	Ochotona princeps	91.91	2.00e-129	454.00
IUUC-Ont-072600	Oreochromis niloticus	77.22	5.00e-120	423.00
IUUC-Oan-073584	Ornithorhynchus anatinus	93.64	3.00e-133	466.00
IUUC-Ocu-074542	Oryctolagus cuniculus	85.71	5.00e-131	460.00
IUUC-Oba-075923	Oryza barthii	36.58	7.00e-44	170.00
IUUC-Obr-076313	Oryza brachyantha	36.47	2.00e-44	171.00
IUUC-Ogl-076932	Oryza glaberrima	36.58	7.00e-44	170.00
IUUC-Ogu-078152	Oryza glumaepatula	36.58	7.00e-44	170.00
IUUC-Oin-079528	Oryza indica	36.58	7.00e-44	170.00
IUUC-Olo-080401	Oryza longistaminata	36.58	7.00e-44	170.00
IUUC-Ome-081553	Oryza meridionalis	36.96	4.00e-44	171.00
IUUC-Oni-082090	Oryza nivara	36.58	7.00e-44	170.00
IUUC-Opu-083583	Oryza punctata	36.47	7.00e-44	170.00
IUUC-Oru-084492	Oryza rufipogon	36.58	7.00e-44	170.00
IUUC-Osa-085383	Oryza sativa	36.58	7.00e-44	170.00
IUUC-Ola-086835	Oryzias latipes	76.06	2.00e-117	414.00
IUUC-Olu-087716	Ostreococcus lucimarinus	27.66	1.00e-24	106.00
IUUC-Oga-088886	Otolemur garnettii	85.71	3.00e-131	461.00
IUUC-Oar-090079	Ovis aries	86.10	1.00e-130	459.00
IUUC-Ptr-091457	Pan troglodytes	85.71	2.00e-130	458.00
IUUC-Pan-092317	Papio anubis	90.81	2.00e-97	348.00
IUUC-Pma-094488	Petromyzon marinus	72.37	2.00e-111	394.00
IUUC-Pno-095049	Phaeosphaeria nodorum	33.58	4.00e-40	158.00
IUUC-Ppa-095341	Physcomitrella patens	38.77	1.00e-52	199.00
IUUC-Pfo-096286	Poecilia formosa	75.29	9.00e-118	416.00
IUUC-Pab-097765	Pongo abelii	85.71	2.00e-130	458.00
IUUC-Pop-099131	Populus trichocarpa	37.74	1.00e-46	179.00
IUUC-Pca-100524	Procavia capensis	78.21	1.00e-101	362.00
IUUC-Ppe-101934	Prunus persica	38.52	2.00e-51	195.00
IUUC-Pva-102577	Pteropus vampyrus	84.94	7.00e-130	456.00
IUUC-Pgr-103521	Puccinia graminis	28.30	2.00e-25	108.00
IUUC-Pte-104304	Pyrenophora teres	34.34	9.00e-41	160.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	34.34	9.00e-41	160.00
IUUC-Rno-105717	Rattus norvegicus	85.33	5.00e-130	456.00
IUUC-Sha-107190	Sarcophilus harrisii	86.87	2.00e-133	468.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	33.47	1.00e-37	149.00
IUUC-Spo-108355	Schizosaccharomyces pombe	33.74	7.00e-40	157.00
IUUC-Smo-109374	Selaginella moellendorffii	42.62	2.00e-57	214.00
IUUC-Sit-110119	Setaria italica	35.69	7.00e-43	167.00
IUUC-Sly-111570	Solanum lycopersicum	36.41	6.00e-40	157.00
IUUC-Stu-112308	Solanum tuberosum	38.91	2.00e-46	178.00
IUUC-Sar-113515	Sorex araneus	90.43	3.00e-47	180.00
IUUC-Sbi-114605	Sorghum bicolor	36.47	3.00e-43	169.00
IUUC-Sre-114906	Sporisorium reilianum	36.54	2.00e-44	172.00
IUUC-Tgu-117087	Taeniopygia guttata	94.92	9.00e-134	468.00
IUUC-Tru-117700	Takifugu rubripes	75.88	3.00e-117	414.00
IUUC-Tni-120470	Tetraodon nigroviridis	76.83	4.00e-119	420.00
IUUC-Tca-121109	Theobroma cacao	38.06	1.00e-41	162.00
IUUC-Tre-122095	Trichoderma reesei	32.43	6.00e-30	124.00
IUUC-Tvi-122580	Trichoderma virens	32.05	3.00e-29	122.00
IUUC-Tae-125129	Triticum aestivum	37.07	5.00e-45	174.00
IUUC-Tur-126658	Triticum urartu	32.83	3.00e-39	154.00
IUUC-Tme-127043	Tuber melanosporum	35.98	3.00e-42	165.00
IUUC-Tbe-127927	Tupaia belangeri	85.71	9.00e-131	459.00
IUUC-Ttr-129231	Tursiops truncatus	86.10	3.00e-131	461.00
IUUC-Uma-129578	Ustilago maydis	36.15	3.00e-43	168.00
IUUC-Vda-129730	Verticillium dahliae	32.53	1.00e-35	143.00
IUUC-Vpa-130677	Vicugna pacos	59.12	2.00e-37	149.00
IUUC-Vvi-130968	Vitis vinifera	39.68	2.00e-47	181.00
IUUC-Xtr-132203	Xenopus tropicalis	80.69	6.00e-124	436.00
IUUC-Xma-133972	Xiphophorus maculatus	74.90	1.00e-117	415.00
IUUC-Yli-134553	Yarrowia lipolytica	34.73	2.00e-35	142.00
IUUC-Zma-134941	Zea mays	39.47	2.00e-43	168.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence