iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112013

Ensembl Protein ID

PGSC0003DMT400072311

UniProt Accession

M1CQ23; M1CQ23_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400028139	PGSC0003DMT400072311	PGSC0003DMT400072311

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.00e-08	34.9	106	148

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl d+ d   +++l+ CgH+fh++C+  w       + + +CP+Cr
   Q: 106  CSICLGDYNDNdmLRLLQdCGHLFHLKCVDPW------LMLNPTCPICR 148
           ********55544555545*************......**********8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MNNTTTTTSD PNSGTGWFLG SEQIRGFDYA IGVSASIVLL FASITMTSYF CTRNQTPQRT 60
INRDENNCVH VEMRIDEATL LSYPKLLYSE AKVNYYKDSS TTSTCCSICL GDYNDNDMLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATAACA CCACCACCAC CACCTCCGAT CCAAATTCCG GCACCGGGTG GTTCCTCGGA 60
TCGGAACAAA TCCGAGGATT CGACTATGCC ATTGGTGTTT CCGCTAGCAT TGTTCTATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001148	Aegilops tauschii	42.00	2.00e-18	84.00
IUUC-Bdi-014078	Brachypodium distachyon	63.46	1.00e-26	112.00
IUUC-Gma-044295	Glycine max	63.28	7.00e-34	135.00
IUUC-Lpe-051365	Leersia perrieri	57.01	3.00e-24	103.00
IUUC-Ogl-077901	Oryza glaberrima	56.76	3.00e-22	97.10
IUUC-Ogu-078319	Oryza glumaepatula	56.76	3.00e-22	97.10
IUUC-Oin-079366	Oryza indica	57.66	9.00e-23	98.60
IUUC-Ome-081462	Oryza meridionalis	57.27	2.00e-22	97.40
IUUC-Oni-082925	Oryza nivara	56.76	3.00e-22	97.10
IUUC-Opu-083948	Oryza punctata	47.62	4.00e-25	106.00
IUUC-Oru-085270	Oryza rufipogon	54.95	4.00e-23	100.00
IUUC-Osa-085759	Oryza sativa	54.95	4.00e-23	100.00
IUUC-Sit-110656	Setaria italica	51.47	7.00e-28	115.00
IUUC-Sly-111713	Solanum lycopersicum	82.68	4.00e-63	232.00
IUUC-Sbi-114665	Sorghum bicolor	46.53	1.00e-24	104.00
IUUC-Tca-121855	Theobroma cacao	56.58	3.00e-42	163.00
IUUC-Tae-124109	Triticum aestivum	63.64	4.00e-29	119.00
IUUC-Tur-126583	Triticum urartu	63.44	5.00e-27	112.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence