iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043290

UUCD1 version

UUC-GlM-00919

Ensembl Protein ID

GLYMA13G11570.3

UniProt Accession

C6SZE8; C6SZE8_SOYBN

Genbank Protein ID

ACU14621.1; ALA09247.1; KRH17704.1; KRH17705.1

Protein Name

PHD transcription factor; Putative uncharacterized protein

Genbank Nucleotide ID

BT090549; KT031223; CM000846; CM000846

Gene Name

LOC100306440; Glyma13g11570.3; GLYMA_13G009100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA13G11570	GLYMA13G11570.3	GLYMA13G11570.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.90e-06	27.6	97	139

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ f  + +  +l+CgH+fh+ C +kw     + + +++CPlCr
   Q: 97   CCVCLTKFepESEINCLSCGHIFHKVCMEKW-----LDYWNITCPLCR 139
           ********663336679**************.....89*********8 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MGLSSLPAPS EGVLCVLLVN TALSISIFKG IVRTILQIVG IRVSSLSPSP DISRNPPEPL 60
EFNLSPSEGF IEEFRSRTPT LRFGSMCGSK QPQHECCCVC LTKFEPESEI NCLSCGHIFH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTAGATACT CAACTTGTGT GTACTGTGTA TGTATGGTTC ATCCCTCTAT AAAGCAAAGG 60
GGTTGCATCA ACTCCAGTAT GAGTCATGAG ATACACTTTT CAGTTCATGA AACACAACAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

gmx:100306440

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ani-009448	Aspergillus nidulans	33.70	9.00e-11	58.50
IUUC-Lpe-051313	Leersia perrieri	39.58	1.00e-22	98.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence