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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-007405
Ensembl Protein ID AT3G10530.1
UniProt Accession Q9LPP3; Q9LPP3_ARATH
Genbank Protein ID AAF76355.1; AAO42310.1; AAP04120.1; AEE74922.1
Protein Name F18K10.11 protein; Putative uncharacterized protein At3g10530; Transducin/WD40 repeat-like superfamily protein
Genbank Nucleotide ID AC013428; BT004313; BT006135; CP002686
Gene Name F18K10.11; At3g10530
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G10530 AT3G10530.1 AT3G10530.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
PINAHINT
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.30e-08 34.9 280 317
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H ++v+++af ++ +l+++++   +ik+WDlr++  ++
   Q: 280  HPGPVSSVAFhPNgHLMATSGKERKIKIWDLRKFEEVQ 317
           899********777999***************998877 PP
   
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MEISSEDNNL MEKVLPPVEQ ESDVELETKV KKYLRGEGAN LETLKDKKLK TQLASREKLY 60
GKSAKAAAKI EKWLLPAEAG YLETEGLEKT WRVKQTDIAN EVDILSSRNQ YDIVLPDFGP 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007405|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATTTTTATTT TCGGACAGAT CATTTATTTA TTTTTGTAAT ATTTTGTTTT TTCTTCTCGT 60
AAAACCCTAA AATATACAAA ACCCTCAAAT TCAGTCTACC AGCGAGGATC GATGTCGGAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007405|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR012952--BING4_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF08149--BING4CT
PF00400--WD40
SMART

SM01033--BING4CT
SM00320--WD40
Gene Ontology

GO:0030686--C:90S preribosome
GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
KEGG ath:AT3G10530
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000921 Aegilops tauschii 61.20 1.00e-172 598.00
IUUC-Atr-002528 Amborella trichopoda 65.03 4.00e-172 597.00
IUUC-Aly-005663 Arabidopsis lyrata 97.57 0.00e+00 1026.00
IUUC-Ang-009764 Aspergillus niger 40.39 2.00e-97 348.00
IUUC-Ame-011572 Astyanax mexicanus 44.42 4.00e-92 331.00
IUUC-Bdi-014915 Brachypodium distachyon 60.45 5.00e-171 593.00
IUUC-Bol-015965 Brassica oleracea 90.13 0.00e+00 922.00
IUUC-Bra-016837 Brassica rapa 89.76 0.00e+00 895.00
IUUC-Cel-018465 Caenorhabditis elegans 39.01 5.00e-88 317.00
IUUC-Cre-022704 Chlamydomonas reinhardtii 44.23 1.00e-122 432.00
IUUC-Cgl-026438 Colletotrichum gloeosporioides 40.23 3.00e-100 358.00
IUUC-Cne-026784 Cryptococcus neoformans 36.88 5.00e-68 251.00
IUUC-Dre-028533 Danio rerio 44.23 2.00e-86 312.00
IUUC-Dse-031280 Dothistroma septosporum 37.12 3.00e-94 338.00
IUUC-Eeu-034982 Erinaceus europaeus 44.74 2.00e-51 195.00
IUUC-Fox-037980 Fusarium oxysporum 38.52 5.00e-95 340.00
IUUC-Fso-038154 Fusarium solani 41.45 2.00e-99 355.00
IUUC-Gmo-039548 Gadus morhua 42.89 1.00e-88 319.00
IUUC-Ggr-039976 Gaeumannomyces graminis 38.87 2.00e-94 339.00
IUUC-Gac-042249 Gasterosteus aculeatus 41.63 5.00e-89 320.00
IUUC-Gma-042693 Glycine max 69.10 0.00e+00 704.00
IUUC-Hvu-047436 Hordeum vulgare 63.42 5.00e-120 423.00
IUUC-Kpa-049329 Komagataella pastoris 39.36 1.00e-89 322.00
IUUC-Lpe-051501 Leersia perrieri 63.08 2.00e-164 575.00
IUUC-Loc-051736 Lepisosteus oculatus 47.31 2.00e-89 322.00
IUUC-Meu-056419 Macropus eugenii 41.13 5.00e-78 284.00
IUUC-Mor-057146 Magnaporthe oryzae 38.89 4.00e-92 331.00
IUUC-Mpo-057512 Magnaporthe poae 42.28 7.00e-96 343.00
IUUC-Mtr-058139 Medicago truncatula 66.54 0.00e+00 682.00
IUUC-Mla-059028 Melampsora laricipopulina 42.74 8.00e-82 296.00
IUUC-Mvi-060533 Microbotryum violaceum 40.21 4.00e-81 295.00
IUUC-Mac-065643 Musa acuminata 66.92 0.00e+00 643.00
IUUC-Ont-071977 Oreochromis niloticus 44.27 7.00e-88 317.00
IUUC-Oba-075525 Oryza barthii 62.31 2.00e-174 604.00
IUUC-Obr-076468 Oryza brachyantha 61.37 3.00e-171 593.00
IUUC-Ogl-077395 Oryza glaberrima 62.31 2.00e-174 604.00
IUUC-Ogu-078730 Oryza glumaepatula 61.74 8.00e-174 602.00
IUUC-Oin-079797 Oryza indica 61.93 3.00e-174 603.00
IUUC-Olo-080539 Oryza longistaminata 61.41 2.00e-171 595.00
IUUC-Oni-082635 Oryza nivara 61.93 7.00e-174 602.00
IUUC-Opu-083733 Oryza punctata 61.67 2.00e-175 607.00
IUUC-Oru-084560 Oryza rufipogon 61.93 3.00e-174 603.00
IUUC-Osa-085463 Oryza sativa 61.74 9.00e-174 602.00
IUUC-Ola-086667 Oryzias latipes 45.34 2.00e-99 355.00
IUUC-Olu-087881 Ostreococcus lucimarinus 42.52 1.00e-104 372.00
IUUC-Pma-094742 Petromyzon marinus 41.73 2.00e-84 305.00
IUUC-Ppa-095230 Physcomitrella patens 47.31 6.00e-129 453.00
IUUC-Pop-099756 Populus trichocarpa 70.97 0.00e+00 716.00
IUUC-Ppe-101354 Prunus persica 72.07 0.00e+00 693.00
IUUC-Pte-104146 Pyrenophora teres 39.71 5.00e-88 317.00
IUUC-Pyt-104559 Pyrenophora triticirepentis 37.78 2.00e-88 318.00
IUUC-Sce-106227 Saccharomyces cerevisiae 41.03 2.00e-96 345.00
IUUC-Sja-107925 Schizosaccharomyces japonicus 40.18 5.00e-96 344.00
IUUC-Spo-108359 Schizosaccharomyces pombe 42.55 7.00e-93 333.00
IUUC-Smo-108814 Selaginella moellendorffii 52.05 1.00e-126 446.00
IUUC-Sit-110158 Setaria italica 62.38 6.00e-165 573.00
IUUC-Sly-111569 Solanum lycopersicum 70.83 0.00e+00 662.00
IUUC-Stu-112403 Solanum tuberosum 70.98 0.00e+00 665.00
IUUC-Sbi-114817 Sorghum bicolor 62.50 2.00e-152 531.00
IUUC-Sre-115150 Sporisorium reilianum 42.69 3.00e-91 328.00
IUUC-Tru-118535 Takifugu rubripes 42.38 1.00e-93 336.00
IUUC-Tca-121165 Theobroma cacao 73.13 0.00e+00 727.00
IUUC-Tre-122114 Trichoderma reesei 40.76 5.00e-103 367.00
IUUC-Tvi-122437 Trichoderma virens 42.67 5.00e-102 364.00
IUUC-Tae-125874 Triticum aestivum 61.20 1.00e-172 598.00
IUUC-Tur-126307 Triticum urartu 58.32 4.00e-167 580.00
IUUC-Tme-127208 Tuber melanosporum 41.49 3.00e-101 361.00
IUUC-Ttr-129047 Tursiops truncatus 40.46 1.00e-90 326.00
IUUC-Uma-129320 Ustilago maydis 42.56 4.00e-90 325.00
IUUC-Vda-129926 Verticillium dahliae 38.60 6.00e-97 347.00
IUUC-Vvi-131643 Vitis vinifera 71.11 0.00e+00 728.00
IUUC-Yli-134674 Yarrowia lipolytica 42.45 2.00e-95 342.00
IUUC-Zma-135903 Zea mays 62.17 2.00e-149 521.00
Created Date 25-Jun-2017

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