iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099148

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000351

Gene Name

POPTRDRAFT_296518; POPTR_0015s06750g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0015s06750	POPTR_0015s06750.1	POPTR_0015s06750.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.20e-07	30.9	113	155

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f   + +++lp C+H+fh +C+  w         + +CPlCr
   Q: 113  CAVCLTRFepTEVLKLLPkCKHAFHVECVDTW------LDAHSTCPLCR 155
           ********55444667779*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

INGDIITPLN PPTPPPPLSQ SNISRPNETP FRTSIAIIVA VLTTIFSVTF LLLLYAKHCK 60
RGSGNTISVT GYDINDPNVR AARKHSGIDR AVIESLPIFR FSSLRGQKEG LECAVCLTRF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTAATGGAG ACATTATCAC ACCATTAAAC CCACCTACAC CTCCTCCGCC CCTTTCGCAG 60
TCAAATATTA GTAGACCAAA TGAGACACCA TTCAGGACAA GCATAGCCAT AATTGTAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0015s06750g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003122	Amborella trichopoda	49.83	5.00e-71	261.00
IUUC-Aly-006151	Arabidopsis lyrata	47.27	5.00e-81	293.00
IUUC-Ath-007131	Arabidopsis thaliana	48.28	6.00e-73	267.00
IUUC-Bdi-014982	Brachypodium distachyon	38.05	3.00e-54	205.00
IUUC-Bol-015760	Brassica oleracea	47.61	4.00e-80	291.00
IUUC-Bra-017357	Brassica rapa	47.44	3.00e-79	288.00
IUUC-Cja-018848	Callithrix jacchus	47.22	2.00e-15	76.60
IUUC-Cho-024540	Choloepus hoffmanni	47.22	1.00e-15	77.40
IUUC-Gma-042757	Glycine max	47.25	2.00e-56	212.00
IUUC-Hvu-047245	Hordeum vulgare	42.11	5.00e-52	197.00
IUUC-Lpe-051226	Leersia perrieri	64.57	7.00e-49	187.00
IUUC-Mtr-057973	Medicago truncatula	46.03	1.00e-60	226.00
IUUC-Mac-065494	Musa acuminata	49.48	2.00e-58	218.00
IUUC-Oan-073236	Ornithorhynchus anatinus	48.61	7.00e-16	77.80
IUUC-Oba-075267	Oryza barthii	63.36	1.00e-47	183.00
IUUC-Ogl-077528	Oryza glaberrima	63.36	1.00e-47	183.00
IUUC-Ogu-078754	Oryza glumaepatula	63.91	3.00e-49	188.00
IUUC-Oin-079781	Oryza indica	63.91	3.00e-49	188.00
IUUC-Ome-081863	Oryza meridionalis	63.91	3.00e-49	188.00
IUUC-Oni-082943	Oryza nivara	63.91	3.00e-49	188.00
IUUC-Opu-083466	Oryza punctata	64.66	4.00e-49	187.00
IUUC-Oru-084675	Oryza rufipogon	63.91	3.00e-49	188.00
IUUC-Osa-085804	Oryza sativa	63.91	4.00e-49	188.00
IUUC-Oar-089245	Ovis aries	48.57	1.00e-15	77.00
IUUC-Ppa-095281	Physcomitrella patens	57.04	1.00e-36	147.00
IUUC-Ppe-102095	Prunus persica	51.60	7.00e-88	317.00
IUUC-Smo-108817	Selaginella moellendorffii	35.06	9.00e-24	103.00
IUUC-Sit-109970	Setaria italica	38.36	3.00e-59	221.00
IUUC-Sly-111677	Solanum lycopersicum	70.15	7.00e-54	204.00
IUUC-Stu-112327	Solanum tuberosum	69.93	9.00e-57	213.00
IUUC-Sbi-114529	Sorghum bicolor	64.44	2.00e-49	189.00
IUUC-Tae-124580	Triticum aestivum	64.06	3.00e-46	178.00
IUUC-Vvi-131553	Vitis vinifera	56.41	5.00e-99	354.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence