iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109205

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377675

Gene Name

SELMODRAFT_429030

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_429030	EFJ08292	EFJ08292

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-47	157.8	453	492
UBD/Beta-Prp	1.20e-54	186.3	189	364

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           +H+++v+++af ++  +l+sGs D+ +++W++++g+llk+
   Q: 453  QHSEPVYSVAFsPNgEFLASGSFDKCLHIWSVKDGNLLKT 492
           5***********777********************99985 PP

UBD/Beta-Prp

   S: 86   cvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk 170
           +v +l+gh ++v  ++++p+g+ l+sGs d+t+r+w +  g    +                  +++++ v+++ ++ +g ll++Gs+D++ r+W +k g+
   Q: 189  QVTILEGHGSEVFICAWNPTGSLLASGSGDSTARIWTIADGPSGVNaqssaprplvlkhfrgKTNEKSKDVTTLDWNAEGTLLATGSYDGQARIW-SKDGE 288
           68899*********************************99988877899************988888899*************************.78*** PP
   S: 171  llrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiri 248
           l  tl + h++++ sl+++++   l+sgs d+t ++wd +tge+ ++++ h++++++v+   n+  ++++s D+ i++
   Q: 289  LKNTLNK-HKGPIFSLKWNKKADLLLSGSVDKTAIVWDAKTGEVKQQFEYHEAPTLDVDWR-NNMSFATCSTDNMIYV 364
           *****99.***************************************************88.9999999999*99975 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MAIITSVELN YLVFRYLHES GFTHTAFTLG YEASLNKMSI DGNLVPPGAL VSFVQKGIQY 60
LELEANLNDD NTDLDGDFSL LQPVELLTKD VAELRQLIRE RREKIEKERE KEREKEREKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGATCA TCACTTCGGT GGAGCTCAAC TATCTCGTCT TTCGCTATCT CCACGAATCA 60
GGTAAGCCTC CGGCGCCGCC AGCGCCAGCG CTAGATCACA CGCAAGGAGA CCGAACCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

KEGG

smo:SELMODRAFT_429030

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005622	Arabidopsis lyrata	62.34	1.00e-139	489.00
IUUC-Cme-027258	Cyanidioschyzon merolae	41.76	3.00e-91	328.00
IUUC-Mtr-058624	Medicago truncatula	60.90	0.00e+00	634.00
IUUC-Mac-065508	Musa acuminata	60.59	2.00e-143	501.00
IUUC-Oan-073562	Ornithorhynchus anatinus	50.55	1.00e-156	545.00
IUUC-Oba-075618	Oryza barthii	65.99	0.00e+00	704.00
IUUC-Oin-079515	Oryza indica	58.69	2.00e-140	492.00
IUUC-Olo-080427	Oryza longistaminata	56.88	5.00e-175	607.00
IUUC-Opu-083505	Oryza punctata	65.92	0.00e+00	705.00
IUUC-Pma-094105	Petromyzon marinus	61.48	3.00e-42	164.00
IUUC-Ppe-101572	Prunus persica	62.61	4.00e-170	590.00
IUUC-Stu-112744	Solanum tuberosum	59.01	0.00e+00	630.00
IUUC-Tae-125368	Triticum aestivum	62.92	0.00e+00	676.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence