iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095868

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545071

Gene Name

PHYPADRAFT_192584

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S182_92V6	PP1S182_92V6.1	PP1S182_92V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-49	164.7	402	440
UBD/Beta-Prp	2.70e-65	221.2	376	567

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+d+v+++++ ++ tll+s+sdD t k+W+l+++++l+
   Q: 402  GHQDEVNAIKWdPTgTLLASCSDDFTAKIWSLKQDRCLH 440
           8***********888**********************97 PP

UBD/Beta-Prp

   S: 24   llatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp........sg.dkl 109
            +at s+d++i v ++ +   ++ ++gh++ev+a+k++p+g +l+++s+D t+k+w+l++  c+h lk+h+++++++++sp        ++  +l
   Q: 376  SFATCSTDKMIYVCKLGDTRPVKVFQGHQDEVNAIKWDPTGTLLASCSDDFTAKIWSLKQDRCLHDLKEHTKEIYTIKWSPtgsgsanpNRdLVL 470
           589****************************************************************************9977776666443589 PP
   S: 110  vsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtv 204
           +s+s d ti++wd+e+g+ l   l+ h++ v +v+++p+g +l+sGs D+++ +W++k g+l++t +g   + +  + ++++g  ++++  ++tv
   Q: 471  ASASFDATIKLWDVEQGSQLF-SLTHHSEPVYSVAFSPNGEYLASGSFDKCLHIWSVKDGSLVKTYRG--SGGIFEVCWNREGDKVAACFSNNTV 562
           9*******************9.********************************************99..9************************ PP
   S: 205  klwdl 209
            + d+
   Q: 563  CVLDF 567
           98886 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MTTITSHEMN FLIFRYLHES GFTHSAFVLG YEAGLYKSNI DGNSVPTGAL ISFVQKGLQY 60
LEMEANLNDD GTEVDGDFSL LQPVDLLTKD MMELRMMIKE KRSKVEREKE KEKEKEREKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCCCTTCC CTCTCTTCCC CCCCCCCTTC TTTCTTTCTT TCTCTCTCTC TCTCTCTCTT 60
CTTCCCCTCC CTCCCTTTGT TCCCTTTTCC CTTGCCCGAG CTCCATTCTC CTTCCGCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR023302--Pept_S9A_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0000118--C:histone deacetylase complex
GO:0003714--F:transcription corepressor activity
GO:0016575--P:histone deacetylation
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0009409--P:response to cold

KEGG

ppp:PHYPADRAFT_192584

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000916	Aegilops tauschii	73.24	2.00e-65	239.00
IUUC-Aml-001717	Ailuropoda melanoleuca	65.16	8.00e-141	493.00
IUUC-Atr-002514	Amborella trichopoda	82.04	0.00e+00	633.00
IUUC-Apl-003708	Anas platyrhynchos	65.16	8.00e-141	493.00
IUUC-Aca-004611	Anolis carolinensis	64.89	1.00e-140	492.00
IUUC-Aly-005622	Arabidopsis lyrata	69.23	2.00e-150	525.00
IUUC-Ath-007137	Arabidopsis thaliana	69.29	4.00e-151	527.00
IUUC-Ago-007869	Ashbya gossypii	28.06	3.00e-31	129.00
IUUC-Ame-011601	Astyanax mexicanus	65.16	3.00e-142	497.00
IUUC-Bta-013202	Bos taurus	66.30	2.00e-146	511.00
IUUC-Bdi-014315	Brachypodium distachyon	79.06	3.00e-171	594.00
IUUC-Bol-016277	Brassica oleracea	68.93	2.00e-155	541.00
IUUC-Bra-016944	Brassica rapa	67.60	1.00e-154	538.00
IUUC-Cja-018832	Callithrix jacchus	65.16	5.00e-141	493.00
IUUC-Cfa-020029	Canis familiaris	65.16	7.00e-141	493.00
IUUC-Cpo-021682	Cavia porcellus	66.02	4.00e-146	510.00
IUUC-Cre-022979	Chlamydomonas reinhardtii	64.75	2.00e-137	481.00
IUUC-Csa-024075	Chlorocebus sabaeus	65.16	7.00e-141	493.00
IUUC-Cin-025704	Ciona intestinalis	62.13	2.00e-140	491.00
IUUC-Csv-026257	Ciona savignyi	61.96	2.00e-137	481.00
IUUC-Cne-026946	Cryptococcus neoformans	35.22	7.00e-29	121.00
IUUC-Cme-027258	Cyanidioschyzon merolae	43.24	3.00e-99	354.00
IUUC-Dre-027906	Danio rerio	64.36	8.00e-141	493.00
IUUC-Dno-029196	Dasypus novemcinctus	65.16	4.00e-141	494.00
IUUC-Dor-030732	Dipodomys ordii	66.29	8.00e-137	479.00
IUUC-Dme-031939	Drosophila melanogaster	63.26	2.00e-132	465.00
IUUC-Ete-033150	Echinops telfairi	65.96	2.00e-125	441.00
IUUC-Eca-033897	Equus caballus	66.02	3.00e-146	511.00
IUUC-Eeu-034952	Erinaceus europaeus	57.26	2.00e-117	415.00
IUUC-Fca-035734	Felis catus	65.16	5.00e-141	493.00
IUUC-Fal-037185	Ficedula albicollis	65.16	6.00e-141	493.00
IUUC-Gmo-038870	Gadus morhua	64.46	5.00e-145	506.00
IUUC-Gga-041161	Gallus gallus	65.16	4.00e-141	493.00
IUUC-Gac-041844	Gasterosteus aculeatus	66.30	1.00e-146	512.00
IUUC-Gma-043369	Glycine max	70.48	4.00e-170	590.00
IUUC-Ggo-044882	Gorilla gorilla	65.16	7.00e-141	493.00
IUUC-Hsa-046488	Homo sapiens	65.16	7.00e-141	493.00
IUUC-Itr-047958	Ictidomys tridecemlineatus	66.57	7.00e-140	489.00
IUUC-Kpa-049338	Komagataella pastoris	29.50	2.00e-32	132.00
IUUC-Lch-050535	Latimeria chalumnae	65.19	2.00e-145	508.00
IUUC-Lpe-051084	Leersia perrieri	80.11	6.00e-174	603.00
IUUC-Loc-052722	Lepisosteus oculatus	66.02	4.00e-147	514.00
IUUC-Laf-054280	Loxodonta africana	65.16	2.00e-147	514.00
IUUC-Mcc-055203	Macaca mulatta	65.16	7.00e-141	493.00
IUUC-Meu-056563	Macropus eugenii	70.46	3.00e-98	351.00
IUUC-Mtr-058624	Medicago truncatula	68.88	4.00e-155	540.00
IUUC-Mga-059660	Meleagris gallopavo	65.16	4.00e-141	493.00
IUUC-Mvi-060557	Microbotryum violaceum	37.38	5.00e-75	275.00
IUUC-Mmr-060925	Microcebus murinus	65.16	2.00e-140	491.00
IUUC-Mdo-062078	Monodelphis domestica	64.89	1.00e-140	492.00
IUUC-Mmu-063603	Mus musculus	64.89	1.00e-140	492.00
IUUC-Mac-065508	Musa acuminata	73.56	2.00e-123	434.00
IUUC-Mpu-066741	Mustela putorius furo	65.16	7.00e-141	493.00
IUUC-Mlu-068152	Myotis lucifugus	65.16	5.00e-141	493.00
IUUC-Nle-069229	Nomascus leucogenys	65.16	7.00e-141	493.00
IUUC-Opr-070277	Ochotona princeps	54.05	4.00e-106	377.00
IUUC-Ont-071569	Oreochromis niloticus	66.85	1.00e-147	515.00
IUUC-Oan-073562	Ornithorhynchus anatinus	66.02	1.00e-146	512.00
IUUC-Ocu-074280	Oryctolagus cuniculus	65.16	4.00e-141	494.00
IUUC-Oba-075618	Oryza barthii	76.52	5.00e-161	560.00
IUUC-Obr-076718	Oryza brachyantha	76.94	3.00e-175	607.00
IUUC-Ogl-077302	Oryza glaberrima	80.11	7.00e-174	602.00
IUUC-Ogu-078718	Oryza glumaepatula	76.41	6.00e-174	603.00
IUUC-Oin-079515	Oryza indica	67.96	8.00e-103	367.00
IUUC-Olo-080427	Oryza longistaminata	79.83	1.00e-165	575.00
IUUC-Ome-081696	Oryza meridionalis	74.87	1.00e-168	585.00
IUUC-Oni-082137	Oryza nivara	76.41	6.00e-174	603.00
IUUC-Opu-083505	Oryza punctata	72.56	4.00e-160	557.00
IUUC-Oru-085276	Oryza rufipogon	76.41	4.00e-174	603.00
IUUC-Osa-085791	Oryza sativa	76.41	6.00e-174	603.00
IUUC-Ola-087365	Oryzias latipes	66.02	2.00e-146	511.00
IUUC-Olu-087589	Ostreococcus lucimarinus	69.23	6.00e-156	543.00
IUUC-Oga-088357	Otolemur garnettii	62.77	9.00e-130	456.00
IUUC-Oar-089214	Ovis aries	65.16	2.00e-147	514.00
IUUC-Ptr-091532	Pan troglodytes	65.16	7.00e-141	493.00
IUUC-Pan-091927	Papio anubis	65.16	7.00e-141	493.00
IUUC-Psi-093358	Pelodiscus sinensis	66.02	3.00e-146	511.00
IUUC-Pma-094105	Petromyzon marinus	62.88	4.00e-43	167.00
IUUC-Pfo-096158	Poecilia formosa	66.02	2.00e-146	511.00
IUUC-Pab-098705	Pongo abelii	65.16	7.00e-141	493.00
IUUC-Pop-098989	Populus trichocarpa	73.21	9.00e-164	568.00
IUUC-Pca-100256	Procavia capensis	64.52	1.00e-137	482.00
IUUC-Ppe-101572	Prunus persica	73.60	2.00e-155	541.00
IUUC-Pva-102616	Pteropus vampyrus	64.86	1.00e-137	482.00
IUUC-Rno-105411	Rattus norvegicus	64.89	1.00e-140	492.00
IUUC-Sce-106132	Saccharomyces cerevisiae	26.13	7.00e-32	131.00
IUUC-Sha-106636	Sarcophilus harrisii	64.89	2.00e-140	491.00
IUUC-Sja-107844	Schizosaccharomyces japonicus	27.33	6.00e-23	101.00
IUUC-Smo-109301	Selaginella moellendorffii	83.15	0.00e+00	637.00
IUUC-Sit-110710	Setaria italica	79.56	9.00e-179	619.00
IUUC-Sly-111336	Solanum lycopersicum	71.25	1.00e-161	562.00
IUUC-Stu-112786	Solanum tuberosum	65.33	4.00e-146	510.00
IUUC-Sar-112971	Sorex araneus	59.33	4.00e-125	440.00
IUUC-Sbi-114420	Sorghum bicolor	79.56	4.00e-179	620.00
IUUC-Sre-115175	Sporisorium reilianum	46.22	2.00e-59	223.00
IUUC-Ssc-115695	Sus scrofa	65.16	6.00e-141	493.00
IUUC-Tgu-116898	Taeniopygia guttata	65.75	3.00e-146	511.00
IUUC-Tru-118254	Takifugu rubripes	65.16	1.00e-146	512.00
IUUC-Tsy-119424	Tarsius syrichta	51.23	5.00e-97	347.00
IUUC-Tni-119986	Tetraodon nigroviridis	66.30	2.00e-145	508.00
IUUC-Tca-121739	Theobroma cacao	66.75	5.00e-159	553.00
IUUC-Tae-125368	Triticum aestivum	78.95	3.00e-171	594.00
IUUC-Tur-126856	Triticum urartu	80.61	4.00e-86	311.00
IUUC-Tme-127126	Tuber melanosporum	37.40	2.00e-52	199.00
IUUC-Tbe-127767	Tupaia belangeri	66.99	8.00e-125	439.00
IUUC-Ttr-128826	Tursiops truncatus	65.42	7.00e-128	449.00
IUUC-Uma-129469	Ustilago maydis	45.02	7.00e-60	224.00
IUUC-Vpa-130768	Vicugna pacos	64.52	9.00e-138	482.00
IUUC-Vvi-131193	Vitis vinifera	73.94	4.00e-166	577.00
IUUC-Xtr-132842	Xenopus tropicalis	61.60	6.00e-132	463.00
IUUC-Xma-134168	Xiphophorus maculatus	66.02	9.00e-147	512.00
IUUC-Yli-134648	Yarrowia lipolytica	29.97	4.00e-41	162.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence