iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112214

Ensembl Protein ID

PGSC0003DMT400093628

UniProt Accession

M1DSD1; M1DSD1_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400043199	PGSC0003DMT400093628	PGSC0003DMT400093628

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-45	152.4	279	317
UBD/Beta-Prp	2.00e-61	209.0	17	162

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH ++++++af ++  +l+sGs D+ + +W++++ + +k
   Q: 279  GHREPIYSIAFsPNgQYLASGSVDKCMNIWSVKEAKIVK 317
           8***********777****************99887766 PP

UBD/Beta-Prp

   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee................tlsghdgvvncvvvhpdgnllvsGslDr 159
           +++l+gh+++v ++++sp+g+ l+s+s d+t+r+w +  g c ++                  +++++ v+++ ++++g ll++Gs+ +
   Q: 17   LMVLEGHTSEVFTCAWSPEGSLLASASGDSTARIWTIGDGPCNSTiqrrtpnvlvlkplesRATKEHKDVTTLDWNSEGTLLATGSYEG 105
           799*****************************************9**************9988888899******************** PP
   S: 160  tvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtl 218
           +vr+W+   g+l+r l   h  ++ sl++++ g +l+sgs d+t  +w++q+g+  +++
   Q: 106  KVRIWNR-YGELVRNLNN-HCCPILSLKWNKIGDYLLSGSVDRTAVVWNVQSGKPKQQF 162
           *****76.********97.**********************************976655 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MDINTDSTPY EISSSDLMVL EGHTSEVFTC AWSPEGSLLA SASGDSTARI WTIGDGPCNS 60
TIQRRTPNVL VLKPLESRAT KEHKDVTTLD WNSEGTLLAT GSYEGKVRIW NRYGELVRNL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATATCA ACACAGACTC AACCCCATAT GAAATTTCGA GTTCTGATTT AATGGTTTTG 60
GAAGGACATA CCTCAGAGGT TTGACCGCCA CGATTTCATA ATAGGCAAAA ATACTAAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence