iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112773

Ensembl Protein ID

PGSC0003DMT400039941

UniProt Accession

M1B908; M1B908_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG401015451	PGSC0003DMT400039941	PGSC0003DMT400039941

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-30	104.4	355	394
UBD/Beta-Prp	2.30e-50	172.7	181	397

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf........sd..tllvsGsdDgtikvWDl 30
           gH+++v cla         sd  + l sGs D+++kvW++
   Q: 355  GHNGPVKCLAVeqdkesttSDkkWVLYSGSLDKSVKVWSV 394
           8***********9999988666677*************97 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw......dlstgkcvhtlk 91
           h + i+c+ +  +  ll ++s+d+t kvw++++ k+l+s++ he++v++v  s dg +  tgs D+t+k+w             v+tl 
   Q: 181  HWDAISCLSMDHNHGLLYSASWDRTFKVWRADSSKCLESVKAHEDAVNSVVASADG-VVYTGSADGTVKIWqreftpKTIRHVLVQTLL 268
           667899999*99999****************************************9.**************655533333666777788 PP
   S: 92   ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.... 175
           ++e  v++l++++sg+++  Gs+d +++ w+ e++ + +  +l+gh+ +v c+++ +  nl++sGs+D+ + +W  + + +++t     
   Q: 269  NQECAVTALAVNKSGSVVYCGSSDGVVNFWEKEKKNWTHGgVLKGHKLAVLCLESAG--NLVFSGSADKNICVW--RKEGCVHTClsml 353
           **************************************999***********99999..***************..5566666666664 PP
   S: 176  tgghtdsvyslsfdsng........kelvsgsldgtvklwdlqtg 212
           tg h+++v++l++++++          l sgsld++vk+w++++ 
   Q: 354  TG-HNGPVKCLAVEQDKesttsdkkWVLYSGSLDKSVKVWSVSEM 397
           87.*********77777778888778999************9854 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MSSTMNNDEF NVQKSKFSAY DRLSCENSPM NMSPWNQSCN LNAINDDDDD DDDATKNNHK 60
ICLIGSLVRE EGHIYSLATK NDLLYTGSDS KNIRVWKDMK EFSAFKSNSG LVKAIIISGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCAAATACA ACAAACAAAA TAAATCCATA ATCCACCATA ATTTCCCCCA AATTTTTTTT 60
TTAAAAAAAA AATCCCTTTC ATCTAATTTA TAAACATGTC ATCTACTATG AATAACGATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sot:102599658

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence