iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111866

Ensembl Protein ID

Solyc05g042030.2.1

UniProt Accession

K4C0I4; K4C0I4_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc05g042030.2	Solyc05g042030.2.1	Solyc05g042030.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	7.60e-09	36.4	140	188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +v+Ce C++wfHp C++++++e  ++ +++ C++C+s
   Q: 140  YC-KCEMPYNPDDLMVQCEGCKDWFHPICMGMTIDE-AKKLDPFLCSDCSS 188
           78.7*****************************555.555558******87 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MAKTKPGKKD LDSYSIKGTN KVVRVGDCVL MRPSDSDKPP YVAKVDKIEA DHRNNVKVRV 60
QWYYRPEESV GGRRQFHGAK ELFLSDHYDF QSAHTIEGKC IVHSFKNYTK LENVGPEDYF 120

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Nucleotide Sequence
(Fasta)

ATACAGAAGA ACAGACCCTC TTTCTTCTCT CTGTCTGTCT GTCCTACATT TGGTAGCCCC 60
AATTCTCTTC AACTAGGGTT TCTGCTTCTC CTCAGCATTT CCATTTCTCT GCTTGCGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0000785--C:chromatin
GO:0005677--C:chromatin silencing complex
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006342--P:chromatin silencing
GO:0031507--P:heterochromatin assembly

KEGG

sly:101253288

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ani-009279	Aspergillus nidulans	42.11	2.00e-04	41.60
IUUC-Oba-075188	Oryza barthii	76.44	4.00e-96	343.00
IUUC-Stu-112650	Solanum tuberosum	95.37	3.00e-122	429.00
IUUC-Sre-115140	Sporisorium reilianum	48.98	4.00e-08	53.50
IUUC-Tae-122704	Triticum aestivum	77.31	2.00e-96	343.00
IUUC-Tur-126461	Triticum urartu	64.81	1.00e-76	277.00
IUUC-Uma-129425	Ustilago maydis	45.65	2.00e-06	47.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence