iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112365

Ensembl Protein ID

PGSC0003DMT400078695

UniProt Accession

M1D0K0; M1D0K0_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG401030621	PGSC0003DMT400078694	PGSC0003DMT400078694
PGSC0003DMG401030621	PGSC0003DMT400078695	PGSC0003DMT400078695

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-58	191.9	106	144
UBD/Beta-Prp	5.80e-83	279.8	21	310

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt+ v+c++f +  ++lvsGs D t+++WD++tg++lk
   Q: 106  GHTNYVFCVNFnPQaNMLVSGSFDETVRLWDVKTGKCLK 144
           8**********9889**********************97 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghe 94
           +g hk  i++vkfs+d+++lat+s+d+t + wdv++g+ll+++ ghe+++++v fs+dg  lvt+s+D+t+++wd+stg+ + tl+gh+
   Q: 21   SG-HKRAISSVKFSDDGKILATSSADKTARTWDVSDGSLLHEFLGHEQGISDVAFSSDGRHLVTASDDKTVRLWDVSTGSHIKTLTGHT 108
           44.5668889******************************************************************************* PP
   S: 95   dsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
           ++v +++f+p+ + lvsGs d+t+r+wd++tg+cl+ +l  h++ v+ v+++ dg+l+vs+s+D+ +r+Wd +tg +++t   + +++v
   Q: 109  NYVFCVNFNPQANMLVSGSFDETVRLWDVKTGKCLK-VLPAHSDPVTAVNFNRDGSLIVSSSYDGLCRIWDASTGHCMKTIIDDENPPV 196
           ************************************.********************************************999***** PP
   S: 184  yslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs...pnderlvsgssDgsiriWdlrsgdllktlqlhnssvis 269
             ++f++ngk+++ g ld++++lw+++tg++++t+++h +  +++  +    n++++vsgs+D+ +++W l+s++++++l++h ++vis
   Q: 197  SFVKFSPNGKFILVGTLDNSLRLWNFSTGKVLKTYTDHVNSKYCISSTfsiTNGKYIVSGSEDNCVYLWELQSRKIVQKLEGHTDTVIS 285
           *********************************************988899************************************** PP
   S: 270  vavlsfgdnvlvlgse..dskvniwk 293
           v++ ++++n++++gs   d++v++w 
   Q: 286  VSC-NPTQNMIASGSLgnDKTVKVWT 310
           ***.***********999*******8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MASPTETSES FKPYELKFTL SGHKRAISSV KFSDDGKILA TSSADKTART WDVSDGSLLH 60
EFLGHEQGIS DVAFSSDGRH LVTASDDKTV RLWDVSTGSH IKTLTGHTNY VFCVNFNPQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGAAAACCAA AAAAAAATGA AAAAAACATA ACTCGTATCT CGCTTCTCAC ACCATTTATA 60
CGGAAGGAAA CAAGAAACCA GAGAGACAGA CAGCTAAGCT TGATATTTCA GATTCCTCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0048188--C:Set1C/COMPASS complex
GO:0010228--P:vegetative to reproductive phase transition of meristem

KEGG

sot:102585307

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002420	Ailuropoda melanoleuca	66.13	6.00e-127	445.00
IUUC-Atr-002439	Amborella trichopoda	80.78	4.00e-151	525.00
IUUC-Apl-003436	Anas platyrhynchos	64.21	1.00e-116	411.00
IUUC-Aca-004259	Anolis carolinensis	68.90	3.00e-126	443.00
IUUC-Aly-005723	Arabidopsis lyrata	72.47	2.00e-139	487.00
IUUC-Ath-007308	Arabidopsis thaliana	72.47	5.00e-139	485.00
IUUC-Ago-007915	Ashbya gossypii	35.64	2.00e-42	164.00
IUUC-Acl-008045	Aspergillus clavatus	45.75	2.00e-81	295.00
IUUC-Afl-008596	Aspergillus flavus	45.90	7.00e-81	293.00
IUUC-Afu-009074	Aspergillus fumigatus	47.52	2.00e-83	301.00
IUUC-Ani-009318	Aspergillus nidulans	47.00	5.00e-79	287.00
IUUC-Ang-009775	Aspergillus niger	44.59	6.00e-81	293.00
IUUC-Aor-010222	Aspergillus oryzae	45.90	8.00e-81	293.00
IUUC-Ate-010583	Aspergillus terreus	46.30	7.00e-83	300.00
IUUC-Ame-011349	Astyanax mexicanus	68.90	3.00e-126	443.00
IUUC-Bgr-011968	Blumeria graminis	44.63	1.00e-76	278.00
IUUC-Bta-013016	Bos taurus	68.90	2.00e-126	443.00
IUUC-Bci-013948	Botrytis cinerea	44.22	2.00e-72	265.00
IUUC-Bdi-014263	Brachypodium distachyon	70.76	3.00e-134	469.00
IUUC-Bol-015900	Brassica oleracea	70.03	8.00e-131	458.00
IUUC-Bra-017143	Brassica rapa	69.90	4.00e-132	462.00
IUUC-Cel-018355	Caenorhabditis elegans	60.14	3.00e-110	390.00
IUUC-Cja-019936	Callithrix jacchus	66.13	6.00e-127	445.00
IUUC-Cfa-020596	Canis familiaris	66.13	6.00e-127	445.00
IUUC-Cpo-021318	Cavia porcellus	66.13	6.00e-127	445.00
IUUC-Cre-022935	Chlamydomonas reinhardtii	41.98	1.00e-78	285.00
IUUC-Csa-023053	Chlorocebus sabaeus	66.13	6.00e-127	445.00
IUUC-Cho-024642	Choloepus hoffmanni	64.21	2.00e-111	394.00
IUUC-Cin-025495	Ciona intestinalis	64.55	1.00e-121	428.00
IUUC-Csv-025988	Ciona savignyi	65.07	3.00e-120	423.00
IUUC-Cgl-026771	Colletotrichum gloeosporioides	36.09	4.00e-49	189.00
IUUC-Cne-027025	Cryptococcus neoformans	30.49	3.00e-54	204.00
IUUC-Cme-027119	Cyanidioschyzon merolae	53.68	1.00e-101	362.00
IUUC-Dre-027521	Danio rerio	68.90	3.00e-126	443.00
IUUC-Dno-029739	Dasypus novemcinctus	68.90	3.00e-126	443.00
IUUC-Dor-030966	Dipodomys ordii	68.90	2.00e-126	443.00
IUUC-Dse-031189	Dothistroma septosporum	46.32	1.00e-78	285.00
IUUC-Dme-031613	Drosophila melanogaster	67.56	1.00e-125	441.00
IUUC-Ete-033098	Echinops telfairi	60.06	3.00e-114	403.00
IUUC-Eca-033790	Equus caballus	66.13	6.00e-127	445.00
IUUC-Eeu-034805	Erinaceus europaeus	62.54	8.00e-113	398.00
IUUC-Fca-035901	Felis catus	66.13	6.00e-127	445.00
IUUC-Fal-037413	Ficedula albicollis	68.90	1.00e-126	444.00
IUUC-Fox-037876	Fusarium oxysporum	45.89	4.00e-57	213.00
IUUC-Fso-038211	Fusarium solani	37.10	5.00e-53	202.00
IUUC-Gmo-039131	Gadus morhua	68.58	1.00e-125	441.00
IUUC-Ggr-040071	Gaeumannomyces graminis	39.86	2.00e-60	226.00
IUUC-Gga-040789	Gallus gallus	68.90	1.00e-126	444.00
IUUC-Gac-042634	Gasterosteus aculeatus	68.58	1.00e-125	441.00
IUUC-Gma-043987	Glycine max	78.55	1.00e-148	518.00
IUUC-Ggo-044443	Gorilla gorilla	66.13	6.00e-127	445.00
IUUC-Hsa-046290	Homo sapiens	66.13	6.00e-127	445.00
IUUC-Hvu-047077	Hordeum vulgare	61.54	1.00e-83	301.00
IUUC-Itr-048954	Ictidomys tridecemlineatus	66.13	6.00e-127	445.00
IUUC-Kpa-049404	Komagataella pastoris	42.46	6.00e-63	233.00
IUUC-Lch-049539	Latimeria chalumnae	65.71	5.00e-127	446.00
IUUC-Lpe-051082	Leersia perrieri	67.41	2.00e-132	463.00
IUUC-Loc-051743	Lepisosteus oculatus	68.90	3.00e-126	443.00
IUUC-Lma-053188	Leptosphaeria maculans	44.41	4.00e-79	287.00
IUUC-Laf-054432	Loxodonta africana	62.54	1.00e-123	434.00
IUUC-Mcc-055603	Macaca mulatta	66.13	6.00e-127	445.00
IUUC-Meu-056440	Macropus eugenii	64.33	3.00e-109	386.00
IUUC-Mor-056965	Magnaporthe oryzae	35.08	2.00e-63	236.00
IUUC-Mpo-057333	Magnaporthe poae	38.99	5.00e-55	207.00
IUUC-Mtr-057951	Medicago truncatula	75.95	2.00e-146	510.00
IUUC-Mla-058896	Melampsora laricipopulina	38.74	4.00e-62	230.00
IUUC-Mga-060046	Meleagris gallopavo	68.56	3.00e-126	443.00
IUUC-Mvi-060453	Microbotryum violaceum	46.85	2.00e-87	314.00
IUUC-Mmr-061020	Microcebus murinus	61.82	3.00e-119	420.00
IUUC-Mdo-062204	Monodelphis domestica	64.86	2.00e-124	437.00
IUUC-Mmu-063917	Mus musculus	66.13	6.00e-127	445.00
IUUC-Mac-065310	Musa acuminata	72.48	1.00e-136	478.00
IUUC-Mpu-066072	Mustela putorius furo	66.13	6.00e-127	445.00
IUUC-Mlu-068209	Myotis lucifugus	66.13	6.00e-127	445.00
IUUC-Nfi-068538	Neosartorya fischeri	47.19	3.00e-83	301.00
IUUC-Ncr-068651	Neurospora crassa	39.66	4.00e-67	248.00
IUUC-Nle-069383	Nomascus leucogenys	65.20	2.00e-112	397.00
IUUC-Opr-070937	Ochotona princeps	62.54	2.00e-108	384.00
IUUC-Ont-071458	Oreochromis niloticus	68.92	3.00e-126	443.00
IUUC-Oan-073597	Ornithorhynchus anatinus	68.90	2.00e-126	444.00
IUUC-Ocu-074180	Oryctolagus cuniculus	30.28	1.00e-43	169.00
IUUC-Oba-075082	Oryza barthii	61.22	5.00e-108	382.00
IUUC-Obr-076318	Oryza brachyantha	76.78	3.00e-103	366.00
IUUC-Ogl-077251	Oryza glaberrima	67.53	9.00e-130	454.00
IUUC-Ogu-078882	Oryza glumaepatula	56.79	2.00e-120	424.00
IUUC-Oin-079601	Oryza indica	61.00	4.00e-125	439.00
IUUC-Olo-080976	Oryza longistaminata	71.65	1.00e-115	407.00
IUUC-Ome-081430	Oryza meridionalis	67.97	5.00e-130	455.00
IUUC-Oni-082182	Oryza nivara	56.59	2.00e-120	424.00
IUUC-Opu-083880	Oryza punctata	67.32	3.00e-128	449.00
IUUC-Osa-085706	Oryza sativa	67.53	9.00e-130	454.00
IUUC-Ola-087134	Oryzias latipes	68.58	7.00e-126	442.00
IUUC-Olu-087660	Ostreococcus lucimarinus	45.00	3.00e-41	159.00
IUUC-Oga-088672	Otolemur garnettii	68.90	1.00e-126	444.00
IUUC-Oar-089860	Ovis aries	65.23	4.00e-115	406.00
IUUC-Ptr-091513	Pan troglodytes	66.13	6.00e-127	445.00
IUUC-Pan-092046	Papio anubis	66.13	6.00e-127	445.00
IUUC-Psi-093192	Pelodiscus sinensis	68.90	1.00e-126	444.00
IUUC-Pma-094319	Petromyzon marinus	29.87	2.00e-42	164.00
IUUC-Pno-094881	Phaeosphaeria nodorum	47.08	7.00e-86	309.00
IUUC-Ppa-095367	Physcomitrella patens	71.29	4.00e-134	469.00
IUUC-Pfo-097434	Poecilia formosa	68.58	7.00e-126	442.00
IUUC-Pab-098758	Pongo abelii	64.86	3.00e-112	397.00
IUUC-Pop-099778	Populus trichocarpa	78.62	2.00e-149	520.00
IUUC-Pca-100281	Procavia capensis	55.56	7.00e-80	289.00
IUUC-Ppe-101341	Prunus persica	75.95	6.00e-143	498.00
IUUC-Pva-103020	Pteropus vampyrus	65.50	3.00e-126	443.00
IUUC-Pgr-103589	Puccinia graminis	36.68	1.00e-62	232.00
IUUC-Pte-104153	Pyrenophora teres	48.52	1.00e-86	311.00
IUUC-Pyt-104712	Pyrenophora triticirepentis	48.85	5.00e-73	266.00
IUUC-Rno-105858	Rattus norvegicus	66.13	6.00e-127	445.00
IUUC-Sha-107101	Sarcophilus harrisii	65.71	3.00e-127	446.00
IUUC-Sja-107858	Schizosaccharomyces japonicus	43.22	3.00e-59	221.00
IUUC-Spo-108117	Schizosaccharomyces pombe	41.03	8.00e-59	219.00
IUUC-Smo-109155	Selaginella moellendorffii	70.19	5.00e-137	479.00
IUUC-Sit-110688	Setaria italica	70.07	2.00e-133	467.00
IUUC-Sly-110891	Solanum lycopersicum	99.36	0.00e+00	642.00
IUUC-Sar-113309	Sorex araneus	30.28	1.00e-43	169.00
IUUC-Sbi-114284	Sorghum bicolor	70.76	4.00e-133	466.00
IUUC-Sre-115180	Sporisorium reilianum	41.86	6.00e-67	246.00
IUUC-Ssc-116204	Sus scrofa	68.90	1.00e-126	444.00
IUUC-Tgu-117172	Taeniopygia guttata	68.90	1.00e-126	444.00
IUUC-Tru-118320	Takifugu rubripes	68.24	7.00e-126	442.00
IUUC-Tsy-119493	Tarsius syrichta	30.28	9.00e-42	163.00
IUUC-Tni-120660	Tetraodon nigroviridis	69.15	5.00e-78	282.00
IUUC-Tca-121051	Theobroma cacao	82.08	7.00e-152	528.00
IUUC-Tre-122237	Trichoderma reesei	41.96	6.00e-77	280.00
IUUC-Tvi-122635	Trichoderma virens	41.40	3.00e-76	277.00
IUUC-Tae-125819	Triticum aestivum	67.94	1.00e-133	468.00
IUUC-Tur-126217	Triticum urartu	63.95	2.00e-87	314.00
IUUC-Tme-127061	Tuber melanosporum	50.32	1.00e-92	331.00
IUUC-Tbe-127488	Tupaia belangeri	62.34	3.00e-114	403.00
IUUC-Ttr-129309	Tursiops truncatus	62.62	6.00e-118	415.00
IUUC-Uma-129585	Ustilago maydis	40.52	1.00e-71	262.00
IUUC-Vda-129907	Verticillium dahliae	42.91	4.00e-71	261.00
IUUC-Vpa-130384	Vicugna pacos	65.55	1.00e-113	401.00
IUUC-Vvi-131269	Vitis vinifera	82.86	6.00e-150	521.00
IUUC-Xtr-131945	Xenopus tropicalis	68.56	3.00e-126	443.00
IUUC-Xma-132997	Xiphophorus maculatus	68.58	7.00e-126	442.00
IUUC-Yli-134418	Yarrowia lipolytica	41.69	1.00e-72	265.00
IUUC-Zma-135765	Zea mays	69.44	4.00e-131	459.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence