iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006188

Ensembl Protein ID

fgenesh2_kg.3__443__AT3G04730.1

UniProt Accession

D7L2X9; D7L2X9_ARALL

Genbank Protein ID

EFH60724.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

GL348715

Gene Name

IAA16; ARALYDRAFT_477742

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__443__AT3G04730.1	fgenesh2_kg.3__443__AT3G04730.1	fgenesh2_kg.3__443__AT3G04730.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	8.50e-17	61.8	121	217

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 4    vkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtl 57
           vkvs++g+++++++dl+ + +++dL +a+ + +                         l++s++ ++YeD+dGD++ l
   Q: 121  VKVSMDGAPYLRKIDLKLYKTYQDLSDALSKmFSsftigtygpqgmkdfmnesilidLLNGSDYVPTYEDKDGDWM-L 197
           9******************************622566999****************99999***************.* PP
   S: 58   ksDedldkavsllaskksllrlliqk 83
           ++D++++++v+      s++r++i+k
   Q: 198  VGDVPWEMFVD------SCKRIRIMK 217
           ***********......********8 PP

Organism

Arabidopsis lyrata

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MINFEATELR LGLPGGNHGG EMVGKYNGKR GFSETVDLKL NLSSTAMDSV SKVDLENMKE 60
KVVKPPAKAQ VVGWPPVRSF RKNVMSGQKP TTGDATVGND KTSGSSGATS SASVCAAVAY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTAGCCCT TTGTTTCTCT ACACACATAT CACATCCGCT CTCTCTCTCT CTCTCCAGAC 60
AATATAGTTC CCAAAAGAAC TAAAAAAAAA AACCCTAGAA GCCGAAGAAT TTACTACTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

aly:ARALYDRAFT_477742

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002559	Amborella trichopoda	60.64	2.00e-78	284.00
IUUC-Ath-007356	Arabidopsis thaliana	96.61	1.00e-115	407.00
IUUC-Bdi-014859	Brachypodium distachyon	52.92	8.00e-70	256.00
IUUC-Bol-016371	Brassica oleracea	89.83	3.00e-105	373.00
IUUC-Bra-016936	Brassica rapa	89.41	4.00e-106	376.00
IUUC-Hvu-047087	Hordeum vulgare	67.82	4.00e-64	236.00
IUUC-Mtr-058641	Medicago truncatula	65.60	4.00e-80	290.00
IUUC-Obr-076745	Oryza brachyantha	51.87	3.00e-63	233.00
IUUC-Ogl-077429	Oryza glaberrima	49.62	4.00e-60	223.00
IUUC-Pop-099218	Populus trichocarpa	71.26	2.00e-84	304.00
IUUC-Sit-110063	Setaria italica	57.41	3.00e-69	254.00
IUUC-Sly-111769	Solanum lycopersicum	67.46	1.00e-88	318.00
IUUC-Stu-112038	Solanum tuberosum	68.25	1.00e-85	308.00
IUUC-Sbi-114725	Sorghum bicolor	71.26	7.00e-65	239.00
IUUC-Tca-121532	Theobroma cacao	70.08	2.00e-88	317.00
IUUC-Tur-126762	Triticum urartu	48.66	9.00e-58	216.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence