iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112055

Ensembl Protein ID

PGSC0003DMT400078422

UniProt Accession

M1D028; M1D028_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG402030529	PGSC0003DMT400078422	PGSC0003DMT400078422

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-15	57.2	145	177

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDl 30
           gHt +v++++f   +++l++s++ D ++k+WD+
   Q: 145  GHTKGVSAIRFfpkHGHLILSAGMDTKVKIWDV 177
           8*********99754489**************7 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MKGCDAISVY NIPQHEQKKR KLEKKKEKME EEGDEQDVDM TEVDNPSTDM WLMKNRKSPW 60
VGKKEGLQVE LSEEQKKYAE EYAKKKGEER GGDKDKAEPM VEKSTFHGKE EKDYQGRFWI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTCTCACA TGGTATCAGA GCTTGTACTC AATTAAGTAT AAACATATTG TGAGTTGTGA 60
CATATTGCCG ATTTTCACAT ATCTGCAAAT CCCAATATGG ATCTCTTACA ATCCTACCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence