iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113781

UUCD1 version

UUC-SoB-01728

Ensembl Protein ID

Sb05g013830.1

UniProt Accession

A0A1B6PRR0; A0A1B6PRR0_SORBI

Genbank Protein ID

KXG28340.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000764

Gene Name

SORBI_005G112300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb05g013830	Sb05g013830.1	Sb05g013830.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.40e-53	181.8	31	249

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 169  fldlslpvpgkeetkke.......................................................slqdcLesftkeeelegenkyyce 209
             +++l++ ++++t  e                                                       sl  cL++f +ee l  e+++yc+
   Q: 31   SSKFQLQLIDDSNTVIEksndairvpqsslatvffinwlkedlkkidthhleylpevfmygppakrtrgealSLYACLDAFLREEPLVPEDMWYCP 126
           445555555555555556666666777777777777777777777777777777777777777777777777************************ PP
   S: 210  kckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.LdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvkn.ek 303
           +ck++++a+kkl+l++lPevL++hLkRfsfs++   ++k+++ v+fp++ Ldl+++ +++++++  +++YeL+av +H+G++ sGHY+a++k  ++
   Q: 127  RCKEQRQASKKLDLWRLPEVLVIHLKRFSFSRS--TKQKLETFVNFPIHdLDLTNYIANKKSSE--RQIYELYAVSNHYGNMASGHYTAHIKLvDE 218
           ****************************99885..778*********************88776..9*************************9455 PP
   S: 304  gkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           ++W++fdDs+V +++e+ev++   + aYvlfY+r
   Q: 219  NRWYNFDDSHVASIDEDEVKT---AAAYVLFYRR 249
           66*******************...********98 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MLVPMLRNQD FMRLVVQSSV STRTHSYHTD SSKFQLQLID DSNTVIEKSN DAIRVPQSSL 60
ATVFFINWLK EDLKKIDTHH LEYLPEVFMY GPPAKRTRGE ALSLYACLDA FLREEPLVPE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGACCATGGA AACACTAACA CCTTGACATC TTGGAAACCC TATGGTGTTC CTCTTCTTGC 60
ACAAATATCT CGCAATGAAA TTGTCACGGG TTTGGATATC CATGAGTTGG TCCATAAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006615--Pept_C19_DUSP
IPR001394--Peptidase_C19_UCH
IPR029346--USP_C
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS51283--DUSP
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF06337--DUSP
PF00443--UCH
PF14533--USP7_C2

SMART

SM00695--DUSP

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Eeu-034693	Erinaceus europaeus	40.21	5.00e-35	142.00
IUUC-Hvu-047686	Hordeum vulgare	78.99	2.00e-126	444.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence