iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131647

Ensembl Protein ID

VIT_12s0028g01340.t01

UniProt Accession

E0CTY0; E0CTY0_VITVI

Genbank Protein ID

CBI22046.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595235

Gene Name

VIT_12s0028g01340

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_12s0028g01340	VIT_12s0028g01340.t01	VIT_12s0028g01340.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-17	63.2	333	373

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf......sd.tllvsGsdDgtikvWDlrtgvl 35
           H++ ++++a       s  t++++++ Dg+i +WDl+ + +
   Q: 333  HENCINAIAPltedgdSKvTRFSTSGLDGKIVIWDLKNQED 373
           889999999669998655899**************988766 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAAISVHQFA KCITCHAWSP DHSMVALCPN SDEVHIYRKS QDKWERVHVL QKHDQIVSGI 60
DWSARSNRIV TVSHDRNSYV WNQEAAEWVP TLVILRLNRA ALCVQWSPRE NKFAVGSGAK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTCCGCGAC AGCAATGGCC GCGATCTCTG TTCACCAGTT CGCTAAGTGC ATCACTTGCC 60
ACGCCTGGAG CCCTGACCAT TCCAGTAGTC CTTTCTAACC CTTATGTGCC TCTTTTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0051015--F:actin filament binding
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

KEGG

vvi:100257410

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	60.57	9.00e-136	475.00
IUUC-Aml-001709	Ailuropoda melanoleuca	41.82	5.00e-83	300.00
IUUC-Atr-002844	Amborella trichopoda	83.48	3.00e-113	400.00
IUUC-Apl-003325	Anas platyrhynchos	42.74	6.00e-81	293.00
IUUC-Aca-004736	Anolis carolinensis	42.20	1.00e-80	292.00
IUUC-Aly-005532	Arabidopsis lyrata	78.88	9.00e-178	615.00
IUUC-Ath-006683	Arabidopsis thaliana	79.14	1.00e-177	614.00
IUUC-Ago-007966	Ashbya gossypii	35.31	4.00e-58	217.00
IUUC-Acl-008334	Aspergillus clavatus	39.95	3.00e-70	258.00
IUUC-Afl-008485	Aspergillus flavus	40.00	2.00e-66	246.00
IUUC-Afu-008780	Aspergillus fumigatus	39.95	1.00e-69	256.00
IUUC-Ani-009417	Aspergillus nidulans	39.62	1.00e-68	252.00
IUUC-Ang-009543	Aspergillus niger	39.41	3.00e-69	254.00
IUUC-Aor-010234	Aspergillus oryzae	40.21	5.00e-70	257.00
IUUC-Ate-010386	Aspergillus terreus	39.25	1.00e-67	249.00
IUUC-Ame-011512	Astyanax mexicanus	42.32	5.00e-84	303.00
IUUC-Bgr-012192	Blumeria graminis	36.41	2.00e-62	232.00
IUUC-Bta-012442	Bos taurus	41.08	9.00e-81	292.00
IUUC-Bci-013616	Botrytis cinerea	37.74	2.00e-62	231.00
IUUC-Bdi-014632	Brachypodium distachyon	74.39	3.00e-174	603.00
IUUC-Bol-016274	Brassica oleracea	79.36	0.00e+00	643.00
IUUC-Bra-016790	Brassica rapa	79.09	0.00e+00	627.00
IUUC-Cel-018122	Caenorhabditis elegans	38.95	1.00e-67	249.00
IUUC-Cja-019899	Callithrix jacchus	41.64	7.00e-82	296.00
IUUC-Cfa-020067	Canis familiaris	41.35	7.00e-81	293.00
IUUC-Cpo-022461	Cavia porcellus	42.16	9.00e-84	302.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	40.84	2.00e-39	154.00
IUUC-Csa-023277	Chlorocebus sabaeus	41.35	9.00e-82	296.00
IUUC-Cho-024449	Choloepus hoffmanni	26.45	2.00e-16	79.00
IUUC-Cin-025186	Ciona intestinalis	37.12	2.00e-64	238.00
IUUC-Csv-026275	Ciona savignyi	38.67	5.00e-68	250.00
IUUC-Cgl-026732	Colletotrichum gloeosporioides	35.85	6.00e-59	220.00
IUUC-Cne-026926	Cryptococcus neoformans	39.45	1.00e-74	272.00
IUUC-Dre-028141	Danio rerio	41.67	3.00e-84	304.00
IUUC-Dno-029092	Dasypus novemcinctus	42.25	1.00e-77	283.00
IUUC-Dor-030559	Dipodomys ordii	41.08	1.00e-81	295.00
IUUC-Dse-031574	Dothistroma septosporum	36.36	4.00e-67	247.00
IUUC-Dme-031907	Drosophila melanogaster	38.02	6.00e-68	249.00
IUUC-Ete-032299	Echinops telfairi	43.32	3.00e-83	301.00
IUUC-Eca-033593	Equus caballus	41.08	8.00e-82	296.00
IUUC-Eeu-035041	Erinaceus europaeus	29.88	1.00e-16	79.70
IUUC-Fca-036254	Felis catus	42.16	7.00e-83	300.00
IUUC-Fal-037453	Ficedula albicollis	43.09	7.00e-84	303.00
IUUC-Fox-037842	Fusarium oxysporum	37.90	3.00e-66	244.00
IUUC-Fso-038276	Fusarium solani	37.57	1.00e-66	245.00
IUUC-Gmo-039673	Gadus morhua	41.76	8.00e-75	273.00
IUUC-Ggr-039762	Gaeumannomyces graminis	38.01	4.00e-62	230.00
IUUC-Gga-040898	Gallus gallus	42.86	8.00e-85	306.00
IUUC-Gac-042531	Gasterosteus aculeatus	41.11	7.00e-76	276.00
IUUC-Gma-043868	Glycine max	82.09	0.00e+00	658.00
IUUC-Ggo-045355	Gorilla gorilla	30.73	3.00e-48	184.00
IUUC-Hsa-046623	Homo sapiens	41.62	8.00e-83	299.00
IUUC-Hvu-047456	Hordeum vulgare	68.68	1.00e-74	271.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	42.16	4.00e-84	304.00
IUUC-Kpa-049288	Komagataella pastoris	33.24	1.00e-48	186.00
IUUC-Lch-049679	Latimeria chalumnae	41.35	1.00e-81	295.00
IUUC-Lpe-050869	Leersia perrieri	74.32	1.00e-173	601.00
IUUC-Loc-052140	Lepisosteus oculatus	41.89	7.00e-80	290.00
IUUC-Lma-053109	Leptosphaeria maculans	38.07	2.00e-66	244.00
IUUC-Laf-054287	Loxodonta africana	41.82	8.00e-81	293.00
IUUC-Mcc-054857	Macaca mulatta	42.82	9.00e-78	283.00
IUUC-Meu-056302	Macropus eugenii	43.13	1.00e-85	308.00
IUUC-Mor-057167	Magnaporthe oryzae	37.53	8.00e-63	233.00
IUUC-Mtr-057659	Medicago truncatula	81.82	0.00e+00	654.00
IUUC-Mla-058886	Melampsora laricipopulina	37.91	1.00e-73	269.00
IUUC-Mga-059279	Meleagris gallopavo	42.86	8.00e-85	306.00
IUUC-Mvi-060302	Microbotryum violaceum	36.73	2.00e-68	252.00
IUUC-Mmr-060752	Microcebus murinus	42.23	1.00e-83	302.00
IUUC-Mdo-062326	Monodelphis domestica	42.47	2.00e-78	285.00
IUUC-Mmu-064099	Mus musculus	42.36	5.00e-84	303.00
IUUC-Mac-064632	Musa acuminata	79.46	0.00e+00	639.00
IUUC-Mpu-066247	Mustela putorius furo	41.62	1.00e-81	295.00
IUUC-Mlu-067571	Myotis lucifugus	42.47	1.00e-83	301.00
IUUC-Nfi-068383	Neosartorya fischeri	40.21	2.00e-70	258.00
IUUC-Ncr-068777	Neurospora crassa	35.92	2.00e-61	228.00
IUUC-Nle-069900	Nomascus leucogenys	42.40	2.00e-78	285.00
IUUC-Opr-070386	Ochotona princeps	38.71	2.00e-63	234.00
IUUC-Ont-071316	Oreochromis niloticus	41.32	3.00e-78	284.00
IUUC-Oan-072692	Ornithorhynchus anatinus	42.86	6.00e-83	300.00
IUUC-Ocu-074187	Oryctolagus cuniculus	42.63	4.00e-82	297.00
IUUC-Oba-075379	Oryza barthii	74.53	1.00e-173	602.00
IUUC-Obr-076404	Oryza brachyantha	73.53	1.00e-174	604.00
IUUC-Ogl-077409	Oryza glaberrima	71.39	4.00e-168	583.00
IUUC-Ogu-078759	Oryza glumaepatula	74.53	1.00e-173	601.00
IUUC-Oin-079118	Oryza indica	74.06	2.00e-175	607.00
IUUC-Olo-081055	Oryza longistaminata	72.81	6.00e-149	519.00
IUUC-Ome-081281	Oryza meridionalis	74.25	4.00e-173	599.00
IUUC-Oni-083043	Oryza nivara	74.53	1.00e-173	602.00
IUUC-Opu-083392	Oryza punctata	63.69	9.00e-142	495.00
IUUC-Oru-084839	Oryza rufipogon	74.53	1.00e-173	602.00
IUUC-Osa-085377	Oryza sativa	74.33	8.00e-176	608.00
IUUC-Ola-087274	Oryzias latipes	42.16	1.00e-75	275.00
IUUC-Oga-088610	Otolemur garnettii	42.43	1.00e-83	301.00
IUUC-Oar-090122	Ovis aries	42.74	3.00e-78	284.00
IUUC-Ptr-091023	Pan troglodytes	41.62	8.00e-83	299.00
IUUC-Pan-091727	Papio anubis	41.89	2.00e-83	301.00
IUUC-Psi-093767	Pelodiscus sinensis	42.20	3.00e-80	291.00
IUUC-Pma-094124	Petromyzon marinus	42.78	2.00e-83	301.00
IUUC-Pno-095031	Phaeosphaeria nodorum	38.50	8.00e-66	243.00
IUUC-Ppa-095738	Physcomitrella patens	59.84	9.00e-137	478.00
IUUC-Pfo-097107	Poecilia formosa	43.05	9.00e-77	279.00
IUUC-Pab-098238	Pongo abelii	41.67	2.00e-83	301.00
IUUC-Pop-098954	Populus trichocarpa	86.94	3.00e-140	489.00
IUUC-Pca-100580	Procavia capensis	41.62	9.00e-82	296.00
IUUC-Ppe-101681	Prunus persica	82.01	0.00e+00	665.00
IUUC-Pva-102928	Pteropus vampyrus	40.27	5.00e-77	280.00
IUUC-Pgr-103309	Puccinia graminis	39.60	1.00e-72	265.00
IUUC-Ptt-103959	Puccinia triticina	38.77	8.00e-71	259.00
IUUC-Pte-104384	Pyrenophora teres	37.43	3.00e-62	231.00
IUUC-Pyt-104686	Pyrenophora triticirepentis	37.43	2.00e-62	231.00
IUUC-Rno-104846	Rattus norvegicus	41.62	7.00e-83	299.00
IUUC-Sce-106411	Saccharomyces cerevisiae	34.65	1.00e-54	206.00
IUUC-Sha-106691	Sarcophilus harrisii	42.40	8.00e-79	286.00
IUUC-Sja-107792	Schizosaccharomyces japonicus	35.62	1.00e-63	236.00
IUUC-Spo-108053	Schizosaccharomyces pombe	34.22	4.00e-60	224.00
IUUC-Ssl-108606	Sclerotinia sclerotiorum	36.93	6.00e-62	230.00
IUUC-Smo-108836	Selaginella moellendorffii	62.23	2.00e-147	514.00
IUUC-Sit-110150	Setaria italica	74.86	2.00e-177	614.00
IUUC-Sly-111048	Solanum lycopersicum	79.16	2.00e-178	617.00
IUUC-Sar-113599	Sorex araneus	50.86	2.00e-63	234.00
IUUC-Sbi-114685	Sorghum bicolor	71.43	6.00e-161	559.00
IUUC-Sre-115090	Sporisorium reilianum	43.86	5.00e-66	244.00
IUUC-Ssc-115851	Sus scrofa	42.74	3.00e-78	284.00
IUUC-Tgu-116701	Taeniopygia guttata	42.74	1.00e-81	295.00
IUUC-Tru-118106	Takifugu rubripes	41.46	3.00e-82	297.00
IUUC-Tsy-119515	Tarsius syrichta	54.17	3.00e-43	167.00
IUUC-Tni-120079	Tetraodon nigroviridis	41.46	1.00e-82	298.00
IUUC-Tca-121645	Theobroma cacao	85.98	0.00e+00	650.00
IUUC-Tre-122045	Trichoderma reesei	39.05	7.00e-67	246.00
IUUC-Tvi-122523	Trichoderma virens	39.21	1.00e-66	246.00
IUUC-Tae-125810	Triticum aestivum	66.43	3.00e-165	573.00
IUUC-Tur-126640	Triticum urartu	69.70	2.00e-154	537.00
IUUC-Tme-127018	Tuber melanosporum	38.60	2.00e-55	208.00
IUUC-Tbe-127321	Tupaia belangeri	47.78	2.00e-72	264.00
IUUC-Ttr-128698	Tursiops truncatus	42.16	1.00e-83	302.00
IUUC-Uma-129423	Ustilago maydis	43.24	4.00e-66	244.00
IUUC-Vda-129706	Verticillium dahliae	36.73	3.00e-61	228.00
IUUC-Xtr-131893	Xenopus tropicalis	42.20	5.00e-82	296.00
IUUC-Xma-133435	Xiphophorus maculatus	43.05	9.00e-77	279.00
IUUC-Yli-134471	Yarrowia lipolytica	37.23	1.00e-62	232.00
IUUC-Zma-135615	Zea mays	70.98	8.00e-173	598.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence