iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099368

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_549771; POPTR_0001s32980g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s32980	POPTR_0001s32980.1	POPTR_0001s32980.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.80e-08	34.8	219	259

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +C+e++   +    +pC Hv+h+dC+ +w       +++++CPlCr
   Q: 219  CVVCKEELkfGK-AAQMPCSHVYHRDCISRW------FKTRDICPLCR 259
           9*****886545.677***************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSIPTRYKFC LRGEFVDDSR SKFHPELLQV CRRIVSLSYQ RTTTEFGYNN NMPSAIVEFN 60
LVNVLRRYML APGVGSDSHY KIYLPEVRKM GTSRTVEAPC SDEANSFLCK KSVEALAYMG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCGTCATGT CGATTCCTAC TCGCTACAAA TTCTGTCTAA GAGGGGAATT TGTTGATGAT 60
AGTAGAAGTA AGTTTCATCC AGAACTGCTG CAAGTTTGCA GACGCATCGT TTCTCTGTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s32980g

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence