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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-006900
UUCD1 version UUC-ArT-01629
Ensembl Protein ID AT3G07525.1
UniProt Accession Q8VZ52; F4JEH1; ATG10_ARATH
Genbank Protein ID AEE74555.1; AEE74556.1; AAL38720.1; AAN13156.1
Protein Name Ubiquitin-like-conjugating enzyme ATG10; Autophagy-related protein 10
Genbank Nucleotide ID AC009853; CP002686; AY065244; AY142587
Gene Name ATG10; At3g07525; F21O3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G07525 AT3G07525.1 AT3G07525.1
AT3G07525 AT3G07525.2 AT3G07525.2
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
HINT
Protein Expression/Proteomics
Status Reviewed
Details
Family Domain References (PMIDs)
E2/Autophagy_C Autophagy_C 18245858
Reviewed
Classification
Family Identity E-value Score Source Orthology
E2/Autophagy_C 40.14 5.00e-21 98.60 IUUC-Hsa-045777
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     E2-like enzyme involved in autophagy. Acts as an E2-like enzyme that catalyzes the conjugation of ATG12 to ATG5. The ATG12-ATG5 conjugates is required for the formation of autophagic vesicles and for the timely progression of senescence and programmed cell death (PCD). Likely serves as an ATG5-recognition molecule. Confers some resistance to nitrogen and carbon starvation. Is also involved in the formation of anthocyanic vacuolar inclusions (AVI). Promotes an autophagic process that constitutes a pro-survival mechanism by controlling the containment of host tissue-destructive microbial infections during necrotrophic pathogen infection, but negatively controls SA-dependent defenses and basal immunity to bacterial infection during biotrophic infection.
 E2-like enzyme involved in autophagy. Acts as an E2-like enzyme that catalyzes the conjugation of ATG12 to ATG5. The ATG12-ATG5 conjugates is required for the formation of autophagic vesicles and for the timely progression of senescence and programmed cell death (PCD). Likely serves as an ATG5-recognition molecule. Confers some resistance to nitrogen and carbon starvation. Is also involved in the formation of anthocyanic vacuolar inclusions (AVI). Promotes an autophagic process that constitutes a pro-survival mechanism by controlling the containment of host tissue-destructive microbial infections during necrotrophic pathogen infection, but negatively controls SA-dependent defenses and basal immunity to bacterial infection during biotrophic infection.
Protein Sequence
(Fasta)
MDSAREVSDG RLTVEGFSVA SRAFADKWKI HNQSFPPWSW VPLINRTLLV SKKEEGYLSL 60
EKIIILSSLE EEIPEDESLN VATDCLEKEE TVDHTILVPT MENEAHYYDF HIVYSASYKV 120
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Protein Fasta Sequence


>IUUC-Ath-006900|E2,E2/Autophagy_C|Arabidopsis thaliana
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Nucleotide Sequence
(Fasta)
CGGAGGTTTA TGCAAGGCGG CGATGGAGGT TGTCGAGGAC GAAGCGGCGG ATTTAATTCG 60
AAACTGGTTT AGATTCGAAA ATCGAATTTC TCCGGTTCGG TTTGGTTGGA TTAGTTAATT 120
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Nucleotide Fasta Sequence


>IUUC-Ath-006900|E2,E2/Autophagy_C|Arabidopsis thaliana
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Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0072--Autophagy
KW-0181--Complete proteome
KW-0436--Ligase
KW-0472--Membrane
KW-0611--Plant defense
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
Interpro

IPR007135--Autophagy-rel_prot_3
Pfam

PF03987--Autophagy_act_C
Gene Ontology

GO:0016021--C:integral component of membrane
GO:0016874--F:ligase activity
GO:0006914--P:autophagy
GO:0043482--P:cellular pigment accumulation
GO:0006995--P:cellular response to nitrogen starvation
GO:0042742--P:defense response to bacterium
GO:0050832--P:defense response to fungus
GO:2000786--P:positive regulation of autophagosome assembly
GO:0090549--P:response to carbon starvation
KEGG ath:AT3G07525
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001704 Ailuropoda melanoleuca 39.13 3.00e-19 87.40
IUUC-Atr-003167 Amborella trichopoda 46.43 2.00e-48 184.00
IUUC-Apl-003998 Anas platyrhynchos 42.25 4.00e-24 102.00
IUUC-Aca-005112 Anolis carolinensis 36.79 2.00e-24 105.00
IUUC-Aly-005641 Arabidopsis lyrata 85.33 9.00e-107 378.00
IUUC-Ani-009502 Aspergillus nidulans 26.62 6.00e-05 40.00
IUUC-Ame-010764 Astyanax mexicanus 45.57 2.00e-15 75.10
IUUC-Bta-012967 Bos taurus 40.94 2.00e-23 102.00
IUUC-Bdi-014516 Brachypodium distachyon 45.62 2.00e-49 187.00
IUUC-Bol-015076 Brassica oleracea 79.11 7.00e-80 289.00
IUUC-Bra-017200 Brassica rapa 78.67 6.00e-80 289.00
IUUC-Cel-018371 Caenorhabditis elegans 32.17 5.00e-13 66.20
IUUC-Cja-019790 Callithrix jacchus 44.74 2.00e-22 98.60
IUUC-Cfa-020853 Canis familiaris 41.96 5.00e-19 87.80
IUUC-Cpo-022106 Cavia porcellus 42.98 9.00e-22 95.90
IUUC-Cre-022874 Chlamydomonas reinhardtii 41.89 7.00e-08 51.20
IUUC-Csa-023343 Chlorocebus sabaeus 38.51 1.00e-22 99.00
IUUC-Cho-024935 Choloepus hoffmanni 43.81 3.00e-19 87.40
IUUC-Cgl-026576 Colletotrichum gloeosporioides 26.53 2.60e-02 31.20
IUUC-Dre-028780 Danio rerio 38.61 2.00e-16 78.20
IUUC-Dor-031022 Dipodomys ordii 29.68 2.00e-11 62.00
IUUC-Dse-031332 Dothistroma septosporum 27.05 4.00e-06 43.90
IUUC-Dme-032024 Drosophila melanogaster 35.90 2.00e-09 54.70
IUUC-Ete-032676 Echinops telfairi 38.89 6.00e-13 66.60
IUUC-Eca-034047 Equus caballus 42.86 4.00e-19 87.00
IUUC-Eeu-035295 Erinaceus europaeus 41.90 5.00e-19 87.00
IUUC-Fal-036966 Ficedula albicollis 44.74 9.00e-23 99.40
IUUC-Gmo-039001 Gadus morhua 38.60 2.00e-15 73.60
IUUC-Ggr-039885 Gaeumannomyces graminis 32.00 2.10e-02 32.00
IUUC-Gga-040185 Gallus gallus 36.69 2.00e-22 98.60
IUUC-Gac-042071 Gasterosteus aculeatus 32.80 2.00e-18 84.70
IUUC-Gma-042902 Glycine max 53.18 3.00e-59 220.00
IUUC-Ggo-044593 Gorilla gorilla 40.14 6.00e-23 99.80
IUUC-Hsa-045777 Homo sapiens 40.14 1.00e-22 99.00
IUUC-Hvu-047482 Hordeum vulgare 64.44 2.00e-07 45.80
IUUC-Itr-048920 Ictidomys tridecemlineatus 43.86 2.00e-22 98.20
IUUC-Lch-049914 Latimeria chalumnae 50.65 6.00e-19 86.70
IUUC-Lpe-051404 Leersia perrieri 40.68 2.00e-31 127.00
IUUC-Loc-051861 Lepisosteus oculatus 40.00 2.60e-02 30.40
IUUC-Laf-053966 Loxodonta africana 41.10 1.00e-23 102.00
IUUC-Mcc-055255 Macaca mulatta 38.74 1.00e-17 81.60
IUUC-Meu-056615 Macropus eugenii 32.56 6.00e-13 66.60
IUUC-Mpo-057422 Magnaporthe poae 30.67 6.10e-02 30.40
IUUC-Mtr-058150 Medicago truncatula 55.25 6.00e-60 223.00
IUUC-Mla-059184 Melampsora laricipopulina 22.60 2.00e-04 38.50
IUUC-Mvi-060243 Microbotryum violaceum 30.47 1.00e-08 52.00
IUUC-Mmr-061555 Microcebus murinus 38.93 1.00e-23 102.00
IUUC-Mdo-062606 Monodelphis domestica 44.74 3.00e-22 98.60
IUUC-Mmu-064359 Mus musculus 36.30 3.00e-18 84.30
IUUC-Mac-065062 Musa acuminata 45.09 3.00e-46 177.00
IUUC-Mpu-066185 Mustela putorius furo 40.94 3.00e-24 104.00
IUUC-Mlu-067633 Myotis lucifugus 40.27 6.00e-23 99.80
IUUC-Nle-069792 Nomascus leucogenys 38.93 1.00e-22 99.40
IUUC-Opr-070828 Ochotona princeps 46.75 5.00e-17 80.50
IUUC-Ont-072408 Oreochromis niloticus 44.87 4.00e-15 73.90
IUUC-Ocu-074327 Oryctolagus cuniculus 46.75 4.00e-17 80.50
IUUC-Oba-075315 Oryza barthii 40.91 6.00e-41 159.00
IUUC-Obr-076063 Oryza brachyantha 43.95 1.00e-38 152.00
IUUC-Ogl-077277 Oryza glaberrima 43.05 2.00e-45 174.00
IUUC-Ogu-078842 Oryza glumaepatula 43.05 2.00e-44 171.00
IUUC-Oin-079514 Oryza indica 43.11 2.00e-46 178.00
IUUC-Olo-081058 Oryza longistaminata 45.32 7.00e-43 168.00
IUUC-Ome-081519 Oryza meridionalis 41.95 9.00e-46 176.00
IUUC-Oni-082277 Oryza nivara 48.24 3.00e-40 158.00
IUUC-Opu-083144 Oryza punctata 43.38 8.00e-46 176.00
IUUC-Oru-084588 Oryza rufipogon 43.05 3.00e-45 174.00
IUUC-Osa-085909 Oryza sativa 41.78 3.00e-43 167.00
IUUC-Ola-086810 Oryzias latipes 35.57 4.00e-21 94.40
IUUC-Oga-088788 Otolemur garnettii 43.86 4.00e-21 94.00
IUUC-Oar-090294 Ovis aries 44.74 1.00e-21 95.90
IUUC-Ptr-091440 Pan troglodytes 39.44 5.00e-22 96.70
IUUC-Pan-092548 Papio anubis 38.51 2.00e-22 98.60
IUUC-Psi-093686 Pelodiscus sinensis 36.09 7.00e-24 103.00
IUUC-Pno-095119 Phaeosphaeria nodorum 25.38 1.00e-06 45.40
IUUC-Pfo-096393 Poecilia formosa 30.64 3.00e-17 81.30
IUUC-Pab-098259 Pongo abelii 40.14 6.00e-23 99.80
IUUC-Pop-099545 Populus trichocarpa 55.20 2.00e-62 231.00
IUUC-Pca-100480 Procavia capensis 42.61 6.00e-19 86.30
IUUC-Ppe-101846 Prunus persica 53.39 3.00e-52 197.00
IUUC-Pva-102978 Pteropus vampyrus 37.79 2.00e-23 102.00
IUUC-Pgr-103285 Puccinia graminis 23.08 7.00e-05 40.00
IUUC-Ptt-103807 Puccinia triticina 25.90 6.00e-06 43.50
IUUC-Rno-105831 Rattus norvegicus 37.43 3.00e-23 100.00
IUUC-Sha-106651 Sarcophilus harrisii 41.09 1.00e-22 99.00
IUUC-Smo-108811 Selaginella moellendorffii 26.79 7.00e-15 73.20
IUUC-Sit-110057 Setaria italica 46.12 1.00e-46 178.00
IUUC-Sly-111795 Solanum lycopersicum 45.37 4.00e-53 200.00
IUUC-Stu-112168 Solanum tuberosum 44.49 7.00e-52 196.00
IUUC-Sar-113345 Sorex araneus 42.98 1.00e-21 95.50
IUUC-Sbi-114155 Sorghum bicolor 44.09 7.00e-45 172.00
IUUC-Sre-115068 Sporisorium reilianum 27.96 8.00e-05 39.70
IUUC-Ssc-116014 Sus scrofa 43.55 3.00e-10 55.80
IUUC-Tgu-117288 Taeniopygia guttata 43.86 6.00e-21 93.20
IUUC-Tru-117563 Takifugu rubripes 43.04 1.00e-13 68.90
IUUC-Tsy-119051 Tarsius syrichta 29.53 5.00e-12 63.50
IUUC-Tni-120201 Tetraodon nigroviridis 41.74 3.00e-16 77.80
IUUC-Tca-121733 Theobroma cacao 51.35 4.00e-62 230.00
IUUC-Tre-121999 Trichoderma reesei 29.17 6.00e-05 40.00
IUUC-Tvi-122677 Trichoderma virens 25.89 3.00e-06 44.30
IUUC-Tae-123626 Triticum aestivum 45.16 3.00e-48 184.00
IUUC-Tur-126141 Triticum urartu 33.33 1.00e-12 63.90
IUUC-Tbe-127590 Tupaia belangeri 37.27 1.00e-23 102.00
IUUC-Ttr-128638 Tursiops truncatus 41.55 6.00e-24 103.00
IUUC-Uma-129378 Ustilago maydis 29.09 2.00e-04 39.30
IUUC-Vda-129872 Verticillium dahliae 30.26 2.20e-01 28.50
IUUC-Vpa-130149 Vicugna pacos 43.86 1.00e-22 99.00
IUUC-Vvi-131240 Vitis vinifera 52.73 9.00e-63 232.00
IUUC-Xma-133582 Xiphophorus maculatus 28.90 5.00e-15 73.60
Created Date 25-Jun-2017

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