iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-027412

UUCD1 version

UUC-DaR-01199

Ensembl Protein ID

ENSDARP00000133655.1

UniProt Accession

Q803H5; Q803H5_DANRE

Genbank Protein ID

AAH44482.1; AAI52685.1; AAI64143.1

Protein Name

Gnb1l protein; Guanine nucleotide binding protein (G protein), beta polypeptide 1, like; Guanine nucleotide-binding protein (G protein), beta polypeptide 1b

Genbank Nucleotide ID

CR854824; BC152684; BC164143

Gene Name

gnb1b; gnb1l

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000104372.1	ENSDART00000172465.1	ENSDARP00000133655.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-42	141.3	224	259
UBD/Beta-Prp	1.30e-53	183.1	136	340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH++++++++f ++ + +++GsdD t++++Dlr + 
   Q: 224  GHESDINAICFfPNgNAFATGSDDATCRLFDLRADQ 259
           8*********99777*****************9875 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetl 133
            r+l gh++  ++++f +d   +vt+s D t  +wd++tg+++ t+ gh+ +v+sls+ p++  +vsG  d  +++wd+++g c + t+
   Q: 136  SRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQ-TF 222
           6899***************7.7****************************************************************.** PP
   S: 134  sghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlngh 221
           +gh++ +n +++ p+gn +++Gs+D t+rl+dl+ ++ l      +    ++s++f+++g+ l++g +d   ++wd  + +    l gh
   Q: 223  TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYsHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGH 311
           *********************************988888877334456799************************************** PP
   S: 222  tdnvksvrfspnderlvsgssDgsiriWd 250
           ++ v+++ +++++  +++gs D  ++iW+
   Q: 312  DNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
           ****************************8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MSELDQLRQE AEQLKNQIRD ARKACADATL SQITANIDPV GRIQMRTRRT LRGHLAKIYA 60
MHWGTDSRLL VSASQDGKLI IWDSYTTNKV HAIPLRSSWV MTCAYAPSGN YVACGGLDNI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCCATTCC TGCGTAAGAG CGCCGCTCGC CCGTGCGCTG CGGCGTGGGG TTTCCCAGGG 60
CAGACTGCAG GGTTACCGCG CCCATCTCCG TCTGATGGCC GGATGAGAGG TGAACTGAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0048920--P:posterior lateral line neuromast primordium migration
GO:0007165--P:signal transduction

KEGG

dre:406796

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000161	Aegilops tauschii	51.10	6.00e-78	284.00
IUUC-Aca-004754	Anolis carolinensis	92.26	6.00e-172	596.00
IUUC-Aly-006025	Arabidopsis lyrata	50.65	8.00e-85	307.00
IUUC-Ath-006617	Arabidopsis thaliana	50.65	2.00e-84	305.00
IUUC-Bdi-014785	Brachypodium distachyon	51.60	9.00e-89	320.00
IUUC-Bol-015657	Brassica oleracea	50.97	2.00e-86	312.00
IUUC-Bra-017618	Brassica rapa	50.97	2.00e-86	312.00
IUUC-Cel-018704	Caenorhabditis elegans	86.47	0.00e+00	630.00
IUUC-Cho-024766	Choloepus hoffmanni	90.77	1.00e-178	619.00
IUUC-Cne-026811	Cryptococcus neoformans	68.47	6.00e-142	496.00
IUUC-Dme-031748	Drosophila melanogaster	84.12	1.00e-176	612.00
IUUC-Eeu-034978	Erinaceus europaeus	89.38	1.00e-145	509.00
IUUC-Hvu-047596	Hordeum vulgare	51.28	9.00e-88	317.00
IUUC-Lch-049422	Latimeria chalumnae	98.53	0.00e+00	665.00
IUUC-Lpe-051040	Leersia perrieri	51.60	3.00e-89	322.00
IUUC-Loc-052939	Lepisosteus oculatus	99.41	0.00e+00	699.00
IUUC-Mtr-058752	Medicago truncatula	45.68	4.00e-90	325.00
IUUC-Mla-059086	Melampsora laricipopulina	73.49	3.00e-153	534.00
IUUC-Mga-060050	Meleagris gallopavo	91.98	6.00e-171	593.00
IUUC-Mvi-060482	Microbotryum violaceum	72.59	3.00e-151	528.00
IUUC-Mpu-066358	Mustela putorius furo	91.33	4.00e-178	617.00
IUUC-Ont-071775	Oreochromis niloticus	99.41	0.00e+00	700.00
IUUC-Oba-075818	Oryza barthii	49.85	3.00e-86	311.00
IUUC-Obr-076229	Oryza brachyantha	50.96	5.00e-86	311.00
IUUC-Ogl-077730	Oryza glaberrima	51.92	1.00e-89	323.00
IUUC-Ogu-078583	Oryza glumaepatula	52.31	1.00e-71	263.00
IUUC-Oin-079661	Oryza indica	50.64	7.00e-86	310.00
IUUC-Olo-080225	Oryza longistaminata	52.31	1.00e-71	263.00
IUUC-Oni-082161	Oryza nivara	51.60	3.00e-89	322.00
IUUC-Opu-084072	Oryza punctata	51.92	5.00e-90	324.00
IUUC-Oru-084316	Oryza rufipogon	50.64	7.00e-86	310.00
IUUC-Osa-085380	Oryza sativa	50.64	7.00e-86	310.00
IUUC-Ola-087490	Oryzias latipes	98.47	0.00e+00	667.00
IUUC-Oar-089360	Ovis aries	91.33	4.00e-178	617.00
IUUC-Pfo-097028	Poecilia formosa	98.82	0.00e+00	697.00
IUUC-Ppe-102016	Prunus persica	44.72	4.00e-88	318.00
IUUC-Pgr-103321	Puccinia graminis	73.49	3.00e-153	534.00
IUUC-Ptt-103728	Puccinia triticina	73.49	3.00e-153	534.00
IUUC-Sja-107891	Schizosaccharomyces japonicus	36.67	3.00e-59	221.00
IUUC-Spo-108352	Schizosaccharomyces pombe	42.33	1.00e-70	259.00
IUUC-Sit-110441	Setaria italica	51.60	4.00e-89	321.00
IUUC-Sbi-114038	Sorghum bicolor	50.96	5.00e-88	318.00
IUUC-Sre-115035	Sporisorium reilianum	70.27	2.00e-143	501.00
IUUC-Tru-117828	Takifugu rubripes	99.41	0.00e+00	700.00
IUUC-Tsy-119354	Tarsius syrichta	89.47	1.00e-175	608.00
IUUC-Tni-120495	Tetraodon nigroviridis	98.24	0.00e+00	689.00
IUUC-Tca-121224	Theobroma cacao	51.61	1.00e-89	323.00
IUUC-Tae-125653	Triticum aestivum	50.96	1.00e-87	316.00
IUUC-Tur-126755	Triticum urartu	50.48	3.00e-88	320.00
IUUC-Uma-129589	Ustilago maydis	70.57	2.00e-143	501.00
IUUC-Xtr-131924	Xenopus tropicalis	92.26	7.00e-172	596.00
IUUC-Xma-133743	Xiphophorus maculatus	98.82	0.00e+00	697.00
IUUC-Yli-134396	Yarrowia lipolytica	34.45	3.00e-65	242.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence