iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH++ v c++f +d + l+sGs+D t+++WDl t ++
   Q: 107  GHAEAVLCVSFsPDgKQLASGSGDTTVRLWDLYTETP 143
           8***********999****************988766 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvn 141
           + +++ gh ++v +v+fspdgk l++gs D t+++wdl t +++ t kgh++ vl++++sp+g++lvsGs+   i +w+ ++g+   ++l+gh+++++
   Q: 101  CSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWIT 198
           47889********************************************************************************999********** PP
   S: 142  cvvvhpd.....gnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnd 234
           ++++ p      ++ +v++s+D+  r+Wd+  +k +  l+g ht +v+++++  +g  + +gs+d t+k+w+  +g+ +r+l+gh  +++s+++s  +
   Q: 199  GISWEPVhlsspCRRFVTSSKDGDARIWDITLKKSIICLSG-HTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALS-TE 293
           **9987522222479*************************9.************98.9*************************************.44 PP
   S: 235  erlvsgssDgsiri 248
             l +g+ D + r 
   Q: 294  YVLRTGAFDHTGRQ 307
           44445556666555 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MTMMDTDEGK TVMCLLTDPE GTHLGSAMYI PQKAGPLQLT QLVNRFLDNE EMLPYSFYVS 60
DEELLVPVGT YLEKNKVSVE KVLTIVYQQQ AVFRIRPVNR CSQTIAGHAE AVLCVSFSPD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATGACCTA ATTGAGTCAG CTTCTTCTTC CCTCTTCTCT CTTCACTTAG AAGAACCGCA 60
AAGAAAAGAC CTTATTCACA CAGGTCGTCT TTGCGAAGCT CATCGTCGAC GATGACCATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR012972--NLE
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08154--NLE
PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005730--C:nucleolus
GO:0005840--C:ribosome
GO:0009553--P:embryo sac development
GO:0000027--P:ribosomal large subunit assembly

KEGG

ath:AT5G52820

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000437	Aegilops tauschii	74.57	0.00e+00	743.00
IUUC-Aml-001793	Ailuropoda melanoleuca	55.53	3.00e-162	563.00
IUUC-Atr-002507	Amborella trichopoda	76.60	0.00e+00	771.00
IUUC-Apl-003964	Anas platyrhynchos	56.22	4.00e-156	543.00
IUUC-Aly-006396	Arabidopsis lyrata	98.94	0.00e+00	962.00
IUUC-Ago-007951	Ashbya gossypii	47.05	3.00e-127	447.00
IUUC-Acl-008298	Aspergillus clavatus	46.78	2.00e-118	419.00
IUUC-Afl-008581	Aspergillus flavus	55.08	2.00e-113	401.00
IUUC-Afu-008906	Aspergillus fumigatus	45.62	1.00e-115	409.00
IUUC-Ani-009189	Aspergillus nidulans	46.30	1.00e-118	419.00
IUUC-Ang-009630	Aspergillus niger	49.34	6.00e-126	443.00
IUUC-Aor-010038	Aspergillus oryzae	47.93	1.00e-129	455.00
IUUC-Ate-010278	Aspergillus terreus	50.23	2.00e-120	425.00
IUUC-Ame-011890	Astyanax mexicanus	55.84	1.00e-156	545.00
IUUC-Bgr-012011	Blumeria graminis	50.25	5.00e-122	430.00
IUUC-Bta-012964	Bos taurus	54.43	5.00e-161	560.00
IUUC-Bci-013592	Botrytis cinerea	46.05	5.00e-117	414.00
IUUC-Bdi-015035	Brachypodium distachyon	73.35	0.00e+00	747.00
IUUC-Bol-015501	Brassica oleracea	93.49	0.00e+00	930.00
IUUC-Bra-017642	Brassica rapa	92.65	0.00e+00	924.00
IUUC-Cel-018430	Caenorhabditis elegans	52.43	4.00e-144	503.00
IUUC-Cja-019125	Callithrix jacchus	55.53	2.00e-162	564.00
IUUC-Cfa-021013	Canis familiaris	55.51	1.00e-155	542.00
IUUC-Cpo-021743	Cavia porcellus	54.89	1.00e-161	562.00
IUUC-Cre-022973	Chlamydomonas reinhardtii	49.79	4.00e-135	473.00
IUUC-Csa-024270	Chlorocebus sabaeus	55.11	6.00e-161	560.00
IUUC-Cin-025795	Ciona intestinalis	53.04	3.00e-156	544.00
IUUC-Csv-025953	Ciona savignyi	53.15	1.00e-155	541.00
IUUC-Cgl-026517	Colletotrichum gloeosporioides	49.87	4.00e-104	370.00
IUUC-Cne-026901	Cryptococcus neoformans	45.98	1.00e-126	445.00
IUUC-Cme-027281	Cyanidioschyzon merolae	47.10	1.00e-115	409.00
IUUC-Dre-028515	Danio rerio	56.84	2.00e-158	551.00
IUUC-Dno-029596	Dasypus novemcinctus	55.53	4.00e-162	563.00
IUUC-Dor-030494	Dipodomys ordii	54.80	2.00e-159	554.00
IUUC-Dse-031538	Dothistroma septosporum	49.67	1.00e-127	449.00
IUUC-Dme-031974	Drosophila melanogaster	53.32	1.00e-147	515.00
IUUC-Ete-032948	Echinops telfairi	59.13	1.00e-74	273.00
IUUC-Eca-033399	Equus caballus	54.89	7.00e-161	559.00
IUUC-Eeu-035013	Erinaceus europaeus	60.58	3.00e-75	275.00
IUUC-Fca-035860	Felis catus	54.47	9.00e-161	559.00
IUUC-Fal-037069	Ficedula albicollis	60.91	8.00e-91	325.00
IUUC-Fox-038059	Fusarium oxysporum	47.39	4.00e-119	421.00
IUUC-Fso-038445	Fusarium solani	47.62	8.00e-119	419.00
IUUC-Gmo-039319	Gadus morhua	54.24	4.00e-147	513.00
IUUC-Ggr-040095	Gaeumannomyces graminis	44.28	4.00e-120	424.00
IUUC-Gga-040303	Gallus gallus	61.73	2.00e-90	324.00
IUUC-Gac-042267	Gasterosteus aculeatus	54.41	5.00e-150	523.00
IUUC-Gma-044360	Glycine max	78.71	0.00e+00	795.00
IUUC-Ggo-044637	Gorilla gorilla	54.68	5.00e-160	556.00
IUUC-Hsa-046128	Homo sapiens	54.89	8.00e-162	562.00
IUUC-Hvu-047373	Hordeum vulgare	73.15	0.00e+00	743.00
IUUC-Itr-048070	Ictidomys tridecemlineatus	54.53	2.00e-160	558.00
IUUC-Kpa-049274	Komagataella pastoris	46.20	9.00e-125	439.00
IUUC-Lch-049907	Latimeria chalumnae	52.10	2.00e-147	514.00
IUUC-Lpe-050778	Leersia perrieri	68.83	0.00e+00	678.00
IUUC-Loc-051889	Lepisosteus oculatus	55.30	2.00e-158	551.00
IUUC-Lma-053041	Leptosphaeria maculans	49.41	3.00e-118	418.00
IUUC-Laf-053598	Loxodonta africana	55.11	3.00e-162	564.00
IUUC-Mcc-055660	Macaca mulatta	55.32	6.00e-161	560.00
IUUC-Meu-056197	Macropus eugenii	49.04	8.00e-135	473.00
IUUC-Mor-056949	Magnaporthe oryzae	45.15	2.00e-117	415.00
IUUC-Mpo-057571	Magnaporthe poae	51.39	3.00e-63	234.00
IUUC-Mtr-058530	Medicago truncatula	78.28	0.00e+00	759.00
IUUC-Mla-059133	Melampsora laricipopulina	51.37	1.00e-120	426.00
IUUC-Mga-059252	Meleagris gallopavo	59.89	2.00e-132	464.00
IUUC-Mvi-060522	Microbotryum violaceum	45.04	9.00e-126	442.00
IUUC-Mmr-061117	Microcebus murinus	54.87	9.00e-159	552.00
IUUC-Mdo-062892	Monodelphis domestica	55.32	1.00e-160	559.00
IUUC-Mmu-064108	Mus musculus	54.89	7.00e-157	546.00
IUUC-Mac-064430	Musa acuminata	79.70	0.00e+00	795.00
IUUC-Mpu-065882	Mustela putorius furo	54.68	3.00e-160	557.00
IUUC-Mlu-068123	Myotis lucifugus	54.68	2.00e-161	561.00
IUUC-Nfi-068484	Neosartorya fischeri	45.83	8.00e-117	413.00
IUUC-Ncr-068649	Neurospora crassa	43.40	4.00e-110	391.00
IUUC-Nle-069140	Nomascus leucogenys	54.68	2.00e-161	561.00
IUUC-Opr-070220	Ochotona princeps	51.92	1.00e-137	482.00
IUUC-Ont-072643	Oreochromis niloticus	54.72	4.00e-157	546.00
IUUC-Ocu-074007	Oryctolagus cuniculus	55.53	9.00e-159	552.00
IUUC-Oba-075904	Oryza barthii	74.62	0.00e+00	749.00
IUUC-Obr-076618	Oryza brachyantha	74.35	0.00e+00	751.00
IUUC-Ogl-077425	Oryza glaberrima	74.62	0.00e+00	749.00
IUUC-Ogu-078586	Oryza glumaepatula	74.24	0.00e+00	749.00
IUUC-Oin-079489	Oryza indica	72.45	0.00e+00	720.00
IUUC-Olo-080766	Oryza longistaminata	74.35	0.00e+00	748.00
IUUC-Ome-081905	Oryza meridionalis	74.84	0.00e+00	751.00
IUUC-Oni-083022	Oryza nivara	74.62	0.00e+00	751.00
IUUC-Opu-083615	Oryza punctata	74.84	0.00e+00	750.00
IUUC-Oru-085076	Oryza rufipogon	74.62	0.00e+00	751.00
IUUC-Osa-085516	Oryza sativa	74.62	0.00e+00	751.00
IUUC-Ola-087290	Oryzias latipes	54.30	3.00e-157	547.00
IUUC-Olu-087898	Ostreococcus lucimarinus	58.92	2.00e-159	555.00
IUUC-Oga-088980	Otolemur garnettii	54.68	3.00e-160	557.00
IUUC-Oar-089580	Ovis aries	52.55	2.00e-131	461.00
IUUC-Ptr-090845	Pan troglodytes	54.04	1.00e-158	551.00
IUUC-Pan-092836	Papio anubis	55.32	2.00e-161	561.00
IUUC-Pno-095052	Phaeosphaeria nodorum	47.47	6.00e-121	427.00
IUUC-Ppa-095432	Physcomitrella patens	71.34	0.00e+00	720.00
IUUC-Pfo-096963	Poecilia formosa	49.48	7.00e-133	466.00
IUUC-Pab-097716	Pongo abelii	51.70	2.00e-149	521.00
IUUC-Pop-099224	Populus trichocarpa	80.25	0.00e+00	811.00
IUUC-Pca-100682	Procavia capensis	57.63	1.00e-125	442.00
IUUC-Ppe-101819	Prunus persica	80.38	0.00e+00	811.00
IUUC-Pva-102338	Pteropus vampyrus	50.99	1.00e-108	385.00
IUUC-Pgr-103583	Puccinia graminis	52.23	3.00e-125	441.00
IUUC-Ptt-103737	Puccinia triticina	41.29	3.00e-91	328.00
IUUC-Pte-104150	Pyrenophora teres	48.62	4.00e-120	424.00
IUUC-Pyt-104606	Pyrenophora triticirepentis	48.62	4.00e-120	424.00
IUUC-Rno-105987	Rattus norvegicus	55.11	2.00e-161	561.00
IUUC-Sce-106315	Saccharomyces cerevisiae	53.23	4.00e-131	460.00
IUUC-Sha-107273	Sarcophilus harrisii	55.96	2.00e-163	567.00
IUUC-Sja-107677	Schizosaccharomyces japonicus	45.81	7.00e-118	416.00
IUUC-Spo-108092	Schizosaccharomyces pombe	47.00	3.00e-119	421.00
IUUC-Ssl-108442	Sclerotinia sclerotiorum	45.80	6.00e-115	407.00
IUUC-Smo-108855	Selaginella moellendorffii	66.04	0.00e+00	676.00
IUUC-Sit-110329	Setaria italica	74.52	0.00e+00	756.00
IUUC-Sly-111830	Solanum lycopersicum	80.00	0.00e+00	802.00
IUUC-Stu-112603	Solanum tuberosum	80.00	0.00e+00	801.00
IUUC-Sar-113504	Sorex araneus	48.20	4.00e-35	141.00
IUUC-Sbi-114560	Sorghum bicolor	73.82	0.00e+00	739.00
IUUC-Sre-115133	Sporisorium reilianum	39.86	2.00e-120	425.00
IUUC-Ssc-115903	Sus scrofa	54.68	8.00e-160	556.00
IUUC-Tgu-116798	Taeniopygia guttata	54.47	7.00e-158	549.00
IUUC-Tru-118361	Takifugu rubripes	54.38	5.00e-159	553.00
IUUC-Tsy-118849	Tarsius syrichta	54.82	1.00e-159	555.00
IUUC-Tni-120094	Tetraodon nigroviridis	55.22	3.00e-158	550.00
IUUC-Tca-121634	Theobroma cacao	81.02	0.00e+00	809.00
IUUC-Tre-122051	Trichoderma reesei	46.24	1.00e-112	399.00
IUUC-Tvi-122322	Trichoderma virens	47.38	2.00e-117	415.00
IUUC-Tae-125822	Triticum aestivum	74.62	0.00e+00	745.00
IUUC-Tur-126766	Triticum urartu	66.35	0.00e+00	716.00
IUUC-Tme-127175	Tuber melanosporum	51.26	2.00e-132	465.00
IUUC-Tbe-127779	Tupaia belangeri	57.38	5.00e-151	526.00
IUUC-Ttr-128224	Tursiops truncatus	55.61	8.00e-149	519.00
IUUC-Uma-129537	Ustilago maydis	42.72	5.00e-121	427.00
IUUC-Vda-129927	Verticillium dahliae	43.85	1.00e-110	392.00
IUUC-Vpa-130658	Vicugna pacos	50.37	1.00e-79	289.00
IUUC-Vvi-131659	Vitis vinifera	79.91	0.00e+00	807.00
IUUC-Xtr-132918	Xenopus tropicalis	50.73	3.00e-146	511.00
IUUC-Xma-133700	Xiphophorus maculatus	55.14	1.00e-158	552.00
IUUC-Yli-134478	Yarrowia lipolytica	50.74	2.00e-136	478.00
IUUC-Zma-135835	Zea mays	70.71	0.00e+00	736.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence