iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014132

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin carboxyl-terminal hydrolase

Genbank Nucleotide ID

CM000882

Gene Name

LOC100842241; BRADI_3g55860

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G55860	BRADI3G55860.1	BRADI3G55860.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/UCH	3.40e-72	244.2	2	317

Active Site

Position(s)	Description	Evidence
82	Nucleophile	{ECO:0000256\|PIRSR:PIRSR038120-1}
157	Proton donor	{ECO:0000256\|PIRSR:PIRSR038120-1}

Domain Profile

DUB/UCH

   S: 7    ewleLesdPglftllvedfgvkrdiqveelysLdpenlglyqepvegllllFkinekressrksqvtsndlevvdediiktiffakqvigNsCat 101
           +w+++esdPg+ft+l+++  vk++ qveelysLd ++l+ + +pv+gl++lFk+    + +r           v +d   ++ffa qvi N+Cat
   Q: 2    SWCTIESDPGVFTELIQEMQVKGV-QVEELYSLDVDSLSEL-RPVYGLIFLFKWVAGGKDERP----------VVNDPNPNLFFARQVITNACAT 84
           7***********************.****************.**************9999993..........3357778*************** PP
   S: 102  yAllsvllncedklldlGttlsrlkestkaespenkalalgnqqvlecihnslariesrseperqdedneqytkeafhfvsyvningrlyeldgl 196
           +A+ls l n  +   d+G++ls+lke+t a+ p++k+la++n++ ++++hns+ar+e++ ++e++ +    ++++++hf+sy + +g lyeldgl
   Q: 85   QAILSILMNRPEI--DIGPELSNLKEFTGAFAPDMKGLAINNSDSIRAAHNSFARPEPFVSDEQKVAG---KDDDVYHFISYLPFEGVLYELDGL 174
           *********9998..***********************************************988555...59********************** PP
   S: 197  kpfPldlgkk...keteelkdklkvvraflerikllesdeirfnllaivadrrviktlrlnvlkid..............keLlkLlkdieseee 274
           k+ P+ lg+     ++  + + ++ v+   eri+ +++ eirfnl+ai ++r+ ++t+ l+ l+                + L + l+++ s +e
   Q: 175  KEGPISLGQYsggPNDLGWLQMVQPVI--QERIERYSQSEIRFNLMAIIKNRKDVYTAELKELEKKreqilqemnkttaaESLNSELSEVASAIE 267
           ********9955457888*********..*****************************99888777899**********9889999********* PP
   S: 275  kieaqlddekekrkkfkiddirRtenydeficifikdlaregilrklvee 324
              +++  e+ek  k+k ++ rR++ny  f++ ++k+la++++l+ lve+
   Q: 268  TVGEKIMMEEEKFMKWKTENVRRKHNYIPFLFNLLKTLAEKKQLKPLVEK 317
           ************************************************98 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MSWCTIESDP GVFTELIQEM QVKGVQVEEL YSLDVDSLSE LRPVYGLIFL FKWVAGGKDE 60
RPVVNDPNPN LFFARQVITN ACATQAILSI LMNRPEIDIG PELSNLKEFT GAFAPDMKGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTGGT GCACGATCGA GTCTGATCCT GGTAAGCATA ACGTTATCTA TCACATGTGC 60
ATCGATTTTT GTTGCTCGTA CTTGGGAGCT TCGGTTACAG GGCATGCTAG TTTGATTTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway

Interpro

IPR001578--Peptidase_C12_UCH
IPR017390--Ubiquitinyl_hydrolase_UCH37

Pfam

PF01088--Peptidase_C12

PRINTS

PR00707--UBCTHYDRLASE

Gene Ontology

GO:0005737--C:cytoplasm
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

bdi:100842241

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000936	Aegilops tauschii	89.79	3.00e-171	593.00
IUUC-Aml-001866	Ailuropoda melanoleuca	49.69	3.00e-83	301.00
IUUC-Atr-002966	Amborella trichopoda	70.27	7.00e-131	459.00
IUUC-Apl-003306	Anas platyrhynchos	45.43	2.00e-77	281.00
IUUC-Aca-004763	Anolis carolinensis	49.06	6.00e-82	296.00
IUUC-Aly-005581	Arabidopsis lyrata	74.55	1.00e-132	464.00
IUUC-Ath-007283	Arabidopsis thaliana	76.06	5.00e-138	483.00
IUUC-Ago-007999	Ashbya gossypii	35.98	8.00e-34	136.00
IUUC-Acl-008231	Aspergillus clavatus	49.17	2.00e-58	218.00
IUUC-Afl-008557	Aspergillus flavus	40.00	5.00e-57	213.00
IUUC-Afu-008988	Aspergillus fumigatus	49.38	2.00e-60	224.00
IUUC-Ani-009420	Aspergillus nidulans	40.83	5.00e-60	223.00
IUUC-Ang-009859	Aspergillus niger	48.36	8.00e-56	209.00
IUUC-Aor-010145	Aspergillus oryzae	40.00	5.00e-57	213.00
IUUC-Ate-010347	Aspergillus terreus	45.35	7.00e-57	213.00
IUUC-Ame-010791	Astyanax mexicanus	48.48	2.00e-84	304.00
IUUC-Bgr-012298	Blumeria graminis	40.00	9.00e-55	206.00
IUUC-Bta-013251	Bos taurus	49.84	4.00e-84	303.00
IUUC-Bci-013786	Botrytis cinerea	41.64	9.00e-60	223.00
IUUC-Bol-015611	Brassica oleracea	75.15	1.00e-139	488.00
IUUC-Bra-017769	Brassica rapa	75.15	3.00e-139	486.00
IUUC-Cel-018604	Caenorhabditis elegans	42.99	1.00e-68	252.00
IUUC-Cja-019768	Callithrix jacchus	45.66	3.00e-78	284.00
IUUC-Cfa-020207	Canis familiaris	49.69	3.00e-83	301.00
IUUC-Cpo-021925	Cavia porcellus	48.43	4.00e-79	287.00
IUUC-Cre-022919	Chlamydomonas reinhardtii	52.15	1.00e-83	302.00
IUUC-Csa-023958	Chlorocebus sabaeus	50.00	1.00e-83	302.00
IUUC-Cho-024928	Choloepus hoffmanni	51.35	2.00e-15	75.90
IUUC-Cin-025771	Ciona intestinalis	40.92	2.00e-69	254.00
IUUC-Csv-026149	Ciona savignyi	42.64	2.00e-71	261.00
IUUC-Cgl-026424	Colletotrichum gloeosporioides	35.14	4.00e-47	181.00
IUUC-Cne-026955	Cryptococcus neoformans	35.54	4.00e-50	190.00
IUUC-Cme-027104	Cyanidioschyzon merolae	31.82	4.00e-47	181.00
IUUC-Dre-027409	Danio rerio	48.17	4.00e-84	303.00
IUUC-Dno-028921	Dasypus novemcinctus	49.37	2.00e-82	298.00
IUUC-Dor-030891	Dipodomys ordii	41.34	4.00e-34	139.00
IUUC-Dse-031170	Dothistroma septosporum	41.36	1.00e-61	229.00
IUUC-Dme-031677	Drosophila melanogaster	49.85	3.00e-83	301.00
IUUC-Ete-032646	Echinops telfairi	39.75	7.00e-42	164.00
IUUC-Eca-033776	Equus caballus	48.49	1.00e-74	272.00
IUUC-Eeu-035305	Erinaceus europaeus	43.96	4.00e-37	147.00
IUUC-Fca-035846	Felis catus	45.80	8.00e-79	286.00
IUUC-Fal-037597	Ficedula albicollis	47.83	1.00e-71	262.00
IUUC-Fox-037670	Fusarium oxysporum	46.52	7.00e-50	189.00
IUUC-Fso-038243	Fusarium solani	46.52	2.00e-49	188.00
IUUC-Gmo-038499	Gadus morhua	45.60	7.00e-74	269.00
IUUC-Ggr-039975	Gaeumannomyces graminis	43.85	4.00e-50	190.00
IUUC-Gga-040904	Gallus gallus	49.39	3.00e-85	307.00
IUUC-Gac-042058	Gasterosteus aculeatus	48.43	1.00e-81	295.00
IUUC-Gma-043030	Glycine max	76.13	3.00e-145	506.00
IUUC-Ggo-044699	Gorilla gorilla	45.81	2.00e-70	258.00
IUUC-Hsa-046227	Homo sapiens	50.00	9.00e-84	302.00
IUUC-Hvu-047359	Hordeum vulgare	91.10	4.00e-169	586.00
IUUC-Itr-048989	Ictidomys tridecemlineatus	45.30	1.00e-78	285.00
IUUC-Lch-049829	Latimeria chalumnae	49.38	6.00e-83	300.00
IUUC-Lpe-050899	Leersia perrieri	89.87	2.00e-155	540.00
IUUC-Loc-052264	Lepisosteus oculatus	48.29	2.00e-80	291.00
IUUC-Lma-053110	Leptosphaeria maculans	40.76	2.00e-52	199.00
IUUC-Laf-053639	Loxodonta africana	49.69	3.00e-83	301.00
IUUC-Mcc-055506	Macaca mulatta	50.00	1.00e-83	302.00
IUUC-Meu-056267	Macropus eugenii	40.30	3.00e-49	189.00
IUUC-Mor-057001	Magnaporthe oryzae	44.67	6.00e-53	200.00
IUUC-Mpo-057608	Magnaporthe poae	44.51	2.00e-36	144.00
IUUC-Mtr-057731	Medicago truncatula	74.77	2.00e-140	491.00
IUUC-Mla-059016	Melampsora laricipopulina	47.24	4.00e-46	176.00
IUUC-Mga-060178	Meleagris gallopavo	48.22	9.00e-77	279.00
IUUC-Mvi-060353	Microbotryum violaceum	38.89	7.00e-55	206.00
IUUC-Mmr-060738	Microcebus murinus	50.31	5.00e-84	303.00
IUUC-Mdo-062266	Monodelphis domestica	50.96	3.00e-57	213.00
IUUC-Mmu-063619	Mus musculus	49.69	1.00e-83	301.00
IUUC-Mac-065301	Musa acuminata	77.88	3.00e-149	520.00
IUUC-Mpu-066058	Mustela putorius furo	49.38	1.00e-83	301.00
IUUC-Mlu-067292	Myotis lucifugus	49.06	1.00e-82	298.00
IUUC-Nfi-068275	Neosartorya fischeri	39.71	6.00e-61	226.00
IUUC-Ncr-068713	Neurospora crassa	39.02	8.00e-57	213.00
IUUC-Nle-069013	Nomascus leucogenys	50.31	2.00e-84	305.00
IUUC-Opr-070628	Ochotona princeps	43.64	1.00e-72	266.00
IUUC-Ont-072688	Oreochromis niloticus	47.81	1.00e-80	292.00
IUUC-Oan-073004	Ornithorhynchus anatinus	47.77	1.00e-60	225.00
IUUC-Ocu-074303	Oryctolagus cuniculus	49.38	2.00e-83	302.00
IUUC-Oba-075002	Oryza barthii	89.36	1.00e-162	564.00
IUUC-Obr-076392	Oryza brachyantha	89.87	3.00e-155	540.00
IUUC-Ogl-077271	Oryza glaberrima	89.36	1.00e-162	564.00
IUUC-Ogu-078493	Oryza glumaepatula	89.67	2.00e-163	567.00
IUUC-Oin-080084	Oryza indica	89.67	2.00e-163	567.00
IUUC-Olo-080803	Oryza longistaminata	89.36	4.00e-163	566.00
IUUC-Ome-081146	Oryza meridionalis	88.75	6.00e-162	562.00
IUUC-Oni-082146	Oryza nivara	89.67	2.00e-163	567.00
IUUC-Opu-083633	Oryza punctata	89.87	3.00e-155	540.00
IUUC-Oru-084789	Oryza rufipogon	89.67	2.00e-163	567.00
IUUC-Osa-086196	Oryza sativa	89.67	2.00e-163	567.00
IUUC-Ola-087126	Oryzias latipes	47.48	2.00e-80	291.00
IUUC-Olu-087665	Ostreococcus lucimarinus	46.15	2.00e-72	264.00
IUUC-Oga-089140	Otolemur garnettii	46.38	3.00e-79	288.00
IUUC-Oar-090296	Ovis aries	49.53	8.00e-83	299.00
IUUC-Ptr-090566	Pan troglodytes	50.00	9.00e-84	302.00
IUUC-Pan-092052	Papio anubis	50.00	1.00e-83	302.00
IUUC-Psi-093723	Pelodiscus sinensis	48.50	2.00e-74	271.00
IUUC-Pma-094568	Petromyzon marinus	42.47	1.00e-63	236.00
IUUC-Pno-095120	Phaeosphaeria nodorum	49.56	2.00e-53	201.00
IUUC-Ppa-095761	Physcomitrella patens	69.79	7.00e-135	472.00
IUUC-Pfo-096210	Poecilia formosa	48.43	2.00e-82	298.00
IUUC-Pab-098463	Pongo abelii	50.00	1.00e-83	302.00
IUUC-Pop-099109	Populus trichocarpa	74.47	2.00e-142	498.00
IUUC-Pca-100108	Procavia capensis	50.62	5.00e-66	243.00
IUUC-Ppe-101176	Prunus persica	76.60	1.00e-142	498.00
IUUC-Pva-102629	Pteropus vampyrus	51.88	2.00e-67	248.00
IUUC-Pgr-103419	Puccinia graminis	48.95	5.00e-58	217.00
IUUC-Pte-104207	Pyrenophora teres	51.79	3.00e-38	150.00
IUUC-Pyt-104471	Pyrenophora triticirepentis	41.32	5.00e-57	213.00
IUUC-Rno-105579	Rattus norvegicus	43.58	8.00e-72	263.00
IUUC-Sha-106894	Sarcophilus harrisii	48.59	7.00e-71	259.00
IUUC-Sja-107732	Schizosaccharomyces japonicus	42.17	9.00e-63	232.00
IUUC-Spo-108371	Schizosaccharomyces pombe	44.09	6.00e-67	246.00
IUUC-Ssl-108467	Sclerotinia sclerotiorum	38.54	3.00e-47	181.00
IUUC-Smo-109396	Selaginella moellendorffii	71.30	4.00e-128	449.00
IUUC-Sit-110630	Setaria italica	85.67	7.00e-161	558.00
IUUC-Sly-110972	Solanum lycopersicum	73.72	3.00e-137	480.00
IUUC-Stu-112185	Solanum tuberosum	75.23	9.00e-150	521.00
IUUC-Sar-113294	Sorex araneus	43.90	2.00e-72	265.00
IUUC-Sbi-113951	Sorghum bicolor	85.37	2.00e-158	550.00
IUUC-Ssc-115501	Sus scrofa	47.91	5.00e-77	280.00
IUUC-Tgu-117152	Taeniopygia guttata	48.16	1.00e-71	262.00
IUUC-Tru-118388	Takifugu rubripes	48.11	9.00e-82	296.00
IUUC-Tsy-119109	Tarsius syrichta	50.00	9.00e-84	302.00
IUUC-Tni-120048	Tetraodon nigroviridis	48.11	7.00e-82	296.00
IUUC-Tca-121750	Theobroma cacao	75.15	8.00e-149	518.00
IUUC-Tre-122130	Trichoderma reesei	38.24	8.00e-55	206.00
IUUC-Tvi-122284	Trichoderma virens	39.14	1.00e-50	192.00
IUUC-Tae-124082	Triticum aestivum	91.10	2.00e-170	590.00
IUUC-Tme-127187	Tuber melanosporum	40.89	2.00e-64	238.00
IUUC-Tbe-127619	Tupaia belangeri	42.81	2.00e-55	208.00
IUUC-Ttr-128867	Tursiops truncatus	44.53	3.00e-55	207.00
IUUC-Vda-129912	Verticillium dahliae	38.67	5.00e-55	207.00
IUUC-Vpa-130552	Vicugna pacos	51.69	2.00e-57	215.00
IUUC-Vvi-130881	Vitis vinifera	75.68	2.00e-142	497.00
IUUC-Xtr-131934	Xenopus tropicalis	48.15	3.00e-84	303.00
IUUC-Xma-133312	Xiphophorus maculatus	48.43	2.00e-82	298.00
IUUC-Yli-134487	Yarrowia lipolytica	34.04	2.00e-51	195.00
IUUC-Zma-135639	Zea mays	73.50	5.00e-143	499.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence