iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-073995

Ensembl Protein ID

ENSOCUP00000002720.3

UniProt Accession

G1SJ32; G1SJ32_RABIT

Genbank Protein ID

ENSOCUP00000002720

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02043911

Gene Name

WDR36

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000003129.3	ENSOCUT00000003132.3	ENSOCUP00000002720.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-20	71.1	564	600
UBD/Beta-Prp	1.30e-50	172.3	439	604

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH++ ++++af +d + l+s++ D++i+ WDl +g l
   Q: 564  GHQGQINDMAFsPDgRWLISAAMDCSIRTWDLPSGCL 600
           8***********99999***************99976 PP

UBD/Beta-Prp

   S: 95   dsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtd 181
            +++++++   g++ v+G +  t+ v+++++g    +   ++ h+g+v++v+v++ ++l v+++  + +++W+ k++ l++ +    ++
   Q: 439  ITATAVDITSCGNFAVIGLSSGTVDVYNMQSGIHRGSfgKDQAHQGSVRGVAVDGLNQLTVTAGSEGLLKFWNFKNKILIHSMN--LDS 525
           344556666678*******************998887889*******************************************4..688 PP
   S: 182  svyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktl 260
           s + + +++++  l  + +d ++ + d++t ++vr++ gh+ ++++++fsp++ +l+s+++D sir Wdl sg l+ ++
   Q: 526  SPKMMLLHRDSGILGLALDDFSISVLDIETRKIVREFSGHQGQINDMAFSPDGRWLISAAMDCSIRTWDLPSGCLIDCF 604
           888999999999**********************************************************999777666 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MERGTEGRTA SALFAGFRAL GLFSSDIPHV VRFNSLKRRF YVTTCVGKSF HTYDVQKLSL 60
VAVSNSVPQE ICCMAADERL VFAAYGNVFS AFARNKEIVH TFKGHKAEIH LLQPFGDHII 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAATCTCGT GTTTTTACAC ATTTTGTAGT CCCACGTCTG ACCCATTTTT TTTTTTTTTT 60
TCTTTAAGAT TTATTTATTT GAAAGGCAGA GTTAGAAACT TCCAACTGCT GGTTCACTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0003723--F:RNA binding
GO:0030516--P:regulation of axon extension
GO:0001895--P:retina homeostasis
GO:0006364--P:rRNA processing

KEGG

ocu:100351582

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	35.77	3.00e-148	519.00
IUUC-Aml-002289	Ailuropoda melanoleuca	93.53	0.00e+00	1699.00
IUUC-Atr-002859	Amborella trichopoda	32.44	1.00e-123	437.00
IUUC-Apl-003505	Anas platyrhynchos	73.85	0.00e+00	1216.00
IUUC-Aca-004339	Anolis carolinensis	71.97	0.00e+00	1300.00
IUUC-Aly-005913	Arabidopsis lyrata	36.29	2.00e-158	553.00
IUUC-Ath-006767	Arabidopsis thaliana	36.33	3.00e-161	562.00
IUUC-Ago-007763	Ashbya gossypii	32.28	1.00e-120	427.00
IUUC-Acl-008275	Aspergillus clavatus	33.38	7.00e-92	331.00
IUUC-Afl-008457	Aspergillus flavus	32.96	8.00e-92	331.00
IUUC-Afu-008914	Aspergillus fumigatus	33.62	2.00e-106	380.00
IUUC-Ani-009225	Aspergillus nidulans	32.09	8.00e-102	365.00
IUUC-Aor-010046	Aspergillus oryzae	32.03	2.00e-117	417.00
IUUC-Ate-010337	Aspergillus terreus	31.12	3.00e-116	412.00
IUUC-Ame-010963	Astyanax mexicanus	66.82	0.00e+00	1212.00
IUUC-Bgr-011973	Blumeria graminis	30.60	2.00e-112	400.00
IUUC-Bta-012462	Bos taurus	92.08	0.00e+00	1650.00
IUUC-Bci-013940	Botrytis cinerea	31.14	3.00e-114	406.00
IUUC-Bdi-014725	Brachypodium distachyon	34.83	4.00e-150	525.00
IUUC-Bol-016534	Brassica oleracea	35.51	4.00e-154	538.00
IUUC-Bra-016781	Brassica rapa	35.19	1.00e-152	533.00
IUUC-Cel-018581	Caenorhabditis elegans	28.56	1.00e-93	337.00
IUUC-Cja-019675	Callithrix jacchus	93.30	0.00e+00	1703.00
IUUC-Cfa-020118	Canis familiaris	91.51	0.00e+00	1644.00
IUUC-Cpo-021798	Cavia porcellus	92.20	0.00e+00	1620.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	29.14	1.00e-27	117.00
IUUC-Csa-023547	Chlorocebus sabaeus	94.30	0.00e+00	1684.00
IUUC-Cho-024518	Choloepus hoffmanni	79.43	0.00e+00	1289.00
IUUC-Cin-025339	Ciona intestinalis	46.79	0.00e+00	801.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	29.85	5.00e-113	402.00
IUUC-Cne-026859	Cryptococcus neoformans	34.63	7.00e-145	508.00
IUUC-Cme-027173	Cyanidioschyzon merolae	28.22	3.00e-89	323.00
IUUC-Dre-027733	Danio rerio	64.25	0.00e+00	1194.00
IUUC-Dno-029439	Dasypus novemcinctus	92.63	0.00e+00	1657.00
IUUC-Dor-030329	Dipodomys ordii	79.58	0.00e+00	1373.00
IUUC-Dse-031511	Dothistroma septosporum	30.03	9.00e-106	378.00
IUUC-Dme-031694	Drosophila melanogaster	39.26	0.00e+00	682.00
IUUC-Ete-032930	Echinops telfairi	85.31	0.00e+00	1362.00
IUUC-Eca-033302	Equus caballus	94.75	0.00e+00	1698.00
IUUC-Eeu-034516	Erinaceus europaeus	92.74	0.00e+00	1714.00
IUUC-Fca-036064	Felis catus	93.97	0.00e+00	1662.00
IUUC-Fal-037024	Ficedula albicollis	71.22	0.00e+00	1294.00
IUUC-Fox-037787	Fusarium oxysporum	29.30	4.00e-96	346.00
IUUC-Fso-038378	Fusarium solani	29.53	3.00e-97	349.00
IUUC-Gmo-039637	Gadus morhua	52.86	8.00e-155	540.00
IUUC-Ggr-040108	Gaeumannomyces graminis	29.31	3.00e-104	373.00
IUUC-Gga-040982	Gallus gallus	72.96	0.00e+00	1333.00
IUUC-Gac-041565	Gasterosteus aculeatus	56.03	0.00e+00	954.00
IUUC-Gma-043185	Glycine max	34.75	6.00e-155	541.00
IUUC-Ggo-045463	Gorilla gorilla	94.20	0.00e+00	1712.00
IUUC-Hsa-045675	Homo sapiens	94.08	0.00e+00	1711.00
IUUC-Hvu-047352	Hordeum vulgare	34.56	1.00e-134	474.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	93.18	0.00e+00	1709.00
IUUC-Kpa-049164	Komagataella pastoris	33.30	7.00e-114	405.00
IUUC-Lch-050476	Latimeria chalumnae	68.57	0.00e+00	1274.00
IUUC-Lpe-051556	Leersia perrieri	28.78	4.00e-97	348.00
IUUC-Loc-052820	Lepisosteus oculatus	67.83	0.00e+00	1232.00
IUUC-Lma-052961	Leptosphaeria maculans	32.14	2.00e-108	387.00
IUUC-Laf-054006	Loxodonta africana	91.33	0.00e+00	1625.00
IUUC-Mcc-055037	Macaca mulatta	94.19	0.00e+00	1714.00
IUUC-Mor-057280	Magnaporthe oryzae	29.90	2.00e-107	384.00
IUUC-Mpo-057408	Magnaporthe poae	29.12	2.00e-99	357.00
IUUC-Mtr-058473	Medicago truncatula	34.03	1.00e-152	534.00
IUUC-Mla-058892	Melampsora laricipopulina	34.20	1.00e-119	424.00
IUUC-Mga-059598	Meleagris gallopavo	61.66	0.00e+00	1026.00
IUUC-Mvi-060334	Microbotryum violaceum	35.05	2.00e-120	427.00
IUUC-Mmr-061239	Microcebus murinus	93.63	0.00e+00	1670.00
IUUC-Mdo-062471	Monodelphis domestica	81.65	0.00e+00	1442.00
IUUC-Mmu-063872	Mus musculus	89.40	0.00e+00	1659.00
IUUC-Mac-064631	Musa acuminata	34.66	3.00e-135	475.00
IUUC-Mpu-066039	Mustela putorius furo	93.74	0.00e+00	1711.00
IUUC-Mlu-067485	Myotis lucifugus	93.42	0.00e+00	1692.00
IUUC-Nfi-068319	Neosartorya fischeri	29.87	6.00e-105	375.00
IUUC-Ncr-068725	Neurospora crassa	29.62	9.00e-103	368.00
IUUC-Nle-069050	Nomascus leucogenys	94.19	0.00e+00	1714.00
IUUC-Opr-070437	Ochotona princeps	81.42	8.00e-142	497.00
IUUC-Ont-071574	Oreochromis niloticus	58.11	0.00e+00	1028.00
IUUC-Oan-072826	Ornithorhynchus anatinus	76.25	0.00e+00	1367.00
IUUC-Oba-075407	Oryza barthii	31.35	4.00e-120	425.00
IUUC-Obr-076451	Oryza brachyantha	35.71	4.00e-156	545.00
IUUC-Ogl-077535	Oryza glaberrima	34.68	1.00e-150	527.00
IUUC-Ogu-077995	Oryza glumaepatula	31.31	4.00e-118	419.00
IUUC-Oin-079431	Oryza indica	34.98	2.00e-152	533.00
IUUC-Olo-080495	Oryza longistaminata	31.16	4.00e-116	412.00
IUUC-Oni-082336	Oryza nivara	33.99	2.00e-140	493.00
IUUC-Opu-084028	Oryza punctata	33.07	7.00e-127	447.00
IUUC-Oru-084500	Oryza rufipogon	31.45	3.00e-117	416.00
IUUC-Osa-086242	Oryza sativa	35.24	3.00e-152	532.00
IUUC-Ola-086612	Oryzias latipes	54.96	0.00e+00	807.00
IUUC-Olu-087703	Ostreococcus lucimarinus	29.88	1.00e-108	387.00
IUUC-Oga-088572	Otolemur garnettii	92.42	0.00e+00	1659.00
IUUC-Oar-090363	Ovis aries	91.96	0.00e+00	1687.00
IUUC-Ptr-090477	Pan troglodytes	94.30	0.00e+00	1689.00
IUUC-Pan-092914	Papio anubis	94.30	0.00e+00	1717.00
IUUC-Psi-093019	Pelodiscus sinensis	72.89	0.00e+00	1321.00
IUUC-Pma-094303	Petromyzon marinus	50.18	0.00e+00	796.00
IUUC-Pno-094938	Phaeosphaeria nodorum	32.51	3.00e-101	363.00
IUUC-Ppa-095720	Physcomitrella patens	34.95	2.00e-152	532.00
IUUC-Pfo-097034	Poecilia formosa	56.05	0.00e+00	972.00
IUUC-Pab-097669	Pongo abelii	93.97	0.00e+00	1712.00
IUUC-Pop-098835	Populus trichocarpa	35.01	2.00e-152	533.00
IUUC-Pca-101097	Procavia capensis	86.26	2.00e-177	616.00
IUUC-Ppe-101430	Prunus persica	34.61	2.00e-155	543.00
IUUC-Pva-103152	Pteropus vampyrus	93.63	0.00e+00	1711.00
IUUC-Pgr-103517	Puccinia graminis	32.00	2.00e-127	450.00
IUUC-Ptt-103697	Puccinia triticina	32.85	2.00e-101	363.00
IUUC-Pte-104121	Pyrenophora teres	30.58	1.00e-107	384.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	30.95	5.00e-110	392.00
IUUC-Rno-105435	Rattus norvegicus	89.50	0.00e+00	1628.00
IUUC-Sce-106202	Saccharomyces cerevisiae	31.87	3.00e-111	396.00
IUUC-Sha-107272	Sarcophilus harrisii	81.79	0.00e+00	1383.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	35.79	1.00e-151	530.00
IUUC-Spo-108256	Schizosaccharomyces pombe	37.05	2.00e-152	532.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	30.98	8.00e-113	401.00
IUUC-Smo-108762	Selaginella moellendorffii	35.40	1.00e-153	536.00
IUUC-Sit-110051	Setaria italica	35.31	8.00e-151	527.00
IUUC-Sly-111181	Solanum lycopersicum	34.38	4.00e-154	538.00
IUUC-Stu-112018	Solanum tuberosum	34.38	4.00e-154	538.00
IUUC-Sar-113348	Sorex araneus	89.55	0.00e+00	1172.00
IUUC-Sbi-114282	Sorghum bicolor	35.11	1.00e-151	530.00
IUUC-Sre-114946	Sporisorium reilianum	32.33	7.00e-93	335.00
IUUC-Ssc-115287	Sus scrofa	93.08	0.00e+00	1695.00
IUUC-Tgu-117138	Taeniopygia guttata	68.74	0.00e+00	1095.00
IUUC-Tru-118232	Takifugu rubripes	57.63	0.00e+00	999.00
IUUC-Tsy-119502	Tarsius syrichta	78.77	0.00e+00	1375.00
IUUC-Tni-120378	Tetraodon nigroviridis	56.26	0.00e+00	973.00
IUUC-Tca-121506	Theobroma cacao	35.04	2.00e-146	513.00
IUUC-Tre-122166	Trichoderma reesei	29.52	5.00e-104	372.00
IUUC-Tvi-122385	Trichoderma virens	29.39	5.00e-105	375.00
IUUC-Tae-122836	Triticum aestivum	34.83	6.00e-154	538.00
IUUC-Tur-126490	Triticum urartu	31.99	1.00e-112	400.00
IUUC-Tme-127157	Tuber melanosporum	32.96	1.00e-112	401.00
IUUC-Tbe-127981	Tupaia belangeri	85.08	0.00e+00	1435.00
IUUC-Ttr-128886	Tursiops truncatus	91.62	0.00e+00	1655.00
IUUC-Uma-129439	Ustilago maydis	31.94	3.00e-100	360.00
IUUC-Vda-129760	Verticillium dahliae	29.45	5.00e-103	369.00
IUUC-Vpa-130456	Vicugna pacos	92.63	0.00e+00	1683.00
IUUC-Vvi-131086	Vitis vinifera	34.03	9.00e-149	520.00
IUUC-Xtr-131829	Xenopus tropicalis	67.68	0.00e+00	1235.00
IUUC-Xma-133588	Xiphophorus maculatus	56.00	0.00e+00	957.00
IUUC-Yli-134328	Yarrowia lipolytica	30.93	2.00e-110	393.00
IUUC-Zma-135808	Zea mays	34.85	4.00e-150	525.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence