iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-117149

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01038329

Gene Name

USP42

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000008831.1	ENSTGUT00000009205.1	ENSTGUP00000009107.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.60e-83	280.5	107	407

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgye 88
           +Gl+NlgNtC++NS+LQcL+ +p+l++++l+ +++++++ e       ++++++++ +++++ ++++a++p+++++ lk++ ++f+  +
   Q: 107  VGLQNLGNTCFLNSTLQCLTYTPPLANYMLSlEHTKSCHVE-----GFCMMCTMESHINQVLCCSNNAIKPTSVINGLKRIGKHFHFGS 190
           6******************************7677777654.....68***************************************** PP
   S: 89   qqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvp 177
           q+Da+Efl+f +d+l++++          ++++         + +  ++ ++li ++F+g l+s++kcl+c+ vs ++epfld++l+++
   Q: 191  QEDAHEFLCFTVDALQKAC----------LNGS--------TKLDRSSQATTLIYQIFGGYLRSRVKCLNCKAVSDTYEPFLDVTLDIK 261
           *******************..........3333........3456778999************************************** PP
   S: 178  gkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfct 266
             +     s++ +Le+f+k+e+l+gen y+c+kckk + a+k+ ++++ ++vL++ LkRf    ++    kink v++p+ Ldl+ +++
   Q: 262  AVT-----SVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRYTIHRSSNVLTISLKRF----ANFTGGKINKDVKYPEYLDLRAYMS 341
           *99.....9***************************************************....668889******************* PP
   S: 267  speekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           ++     e+ +Y L+av+vHsG +++ GHY +++k  +g W++++D +V+ ++ ++vl+   ++aYvlfY r
   Q: 342  QSIG---EPLIYALYAVLVHSGfNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLN---QQAYVLFYIR 407
           9443...49**************************************************...********87 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MTIVNKPKSS KSKKSSSRRS DKSMKPRTKK MTSRTASLGR VPPTEDPNKV SVDKGPGGHI 60
YCRSSQKSKP FAQRDLVVND GIAPPQRILF PPEKICMDWQ QTQSVGVGLQ NLGNTCFLNS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCATAG TTAACAAGCC AAAATCTTCA AAGTCTAAAA AATCTTCTTC AAGACGGTCT 60
GACAAATCTA TGAAACCCCG TACTAAAAAA ATGACGTCTC GCACTGCAAG TTTGGGCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001055	Aegilops tauschii	39.68	2.00e-71	263.00
IUUC-Aml-002303	Ailuropoda melanoleuca	43.64	0.00e+00	682.00
IUUC-Apl-003459	Anas platyrhynchos	73.43	0.00e+00	1554.00
IUUC-Aca-004440	Anolis carolinensis	47.74	0.00e+00	873.00
IUUC-Aly-006389	Arabidopsis lyrata	41.64	3.00e-72	266.00
IUUC-Ath-006710	Arabidopsis thaliana	37.50	4.00e-72	266.00
IUUC-Ago-007836	Ashbya gossypii	27.45	5.00e-34	139.00
IUUC-Ame-011358	Astyanax mexicanus	67.68	4.00e-169	588.00
IUUC-Bta-012803	Bos taurus	43.02	0.00e+00	782.00
IUUC-Cja-019199	Callithrix jacchus	58.33	0.00e+00	716.00
IUUC-Cfa-020597	Canis familiaris	46.76	0.00e+00	814.00
IUUC-Cpo-021945	Cavia porcellus	43.26	0.00e+00	769.00
IUUC-Csa-023485	Chlorocebus sabaeus	58.62	0.00e+00	717.00
IUUC-Cho-024575	Choloepus hoffmanni	48.25	1.00e-164	573.00
IUUC-Cme-027339	Cyanidioschyzon merolae	35.12	1.00e-59	223.00
IUUC-Dre-028442	Danio rerio	60.81	3.00e-168	585.00
IUUC-Dno-029673	Dasypus novemcinctus	47.01	0.00e+00	899.00
IUUC-Ete-033088	Echinops telfairi	69.91	2.00e-147	516.00
IUUC-Eca-033579	Equus caballus	46.30	0.00e+00	832.00
IUUC-Eeu-034511	Erinaceus europaeus	31.83	2.00e-103	370.00
IUUC-Fca-035792	Felis catus	58.50	0.00e+00	699.00
IUUC-Fal-037075	Ficedula albicollis	93.47	0.00e+00	2137.00
IUUC-Gga-040504	Gallus gallus	75.06	0.00e+00	1618.00
IUUC-Ggo-044798	Gorilla gorilla	56.07	0.00e+00	647.00
IUUC-Hsa-046072	Homo sapiens	59.13	0.00e+00	717.00
IUUC-Hvu-047620	Hordeum vulgare	40.91	5.00e-74	272.00
IUUC-Itr-048078	Ictidomys tridecemlineatus	46.82	0.00e+00	903.00
IUUC-Lch-049867	Latimeria chalumnae	42.58	0.00e+00	764.00
IUUC-Loc-052621	Lepisosteus oculatus	57.73	2.00e-163	570.00
IUUC-Laf-054330	Loxodonta africana	59.66	0.00e+00	754.00
IUUC-Mcc-054900	Macaca mulatta	66.06	3.00e-150	524.00
IUUC-Mla-059049	Melampsora laricipopulina	40.99	2.00e-58	219.00
IUUC-Mga-059501	Meleagris gallopavo	66.58	0.00e+00	1452.00
IUUC-Mmr-060864	Microcebus murinus	45.65	0.00e+00	847.00
IUUC-Mdo-062395	Monodelphis domestica	50.41	0.00e+00	1014.00
IUUC-Mmu-064236	Mus musculus	43.99	0.00e+00	746.00
IUUC-Mpu-065822	Mustela putorius furo	44.77	0.00e+00	820.00
IUUC-Mlu-067091	Myotis lucifugus	44.52	0.00e+00	762.00
IUUC-Nle-069004	Nomascus leucogenys	57.96	0.00e+00	717.00
IUUC-Opr-071170	Ochotona princeps	53.89	3.00e-158	552.00
IUUC-Ont-071832	Oreochromis niloticus	62.38	5.00e-162	565.00
IUUC-Oan-073711	Ornithorhynchus anatinus	49.21	0.00e+00	984.00
IUUC-Ocu-074596	Oryctolagus cuniculus	62.79	0.00e+00	658.00
IUUC-Olo-080250	Oryza longistaminata	42.51	4.00e-71	263.00
IUUC-Oga-088641	Otolemur garnettii	46.39	0.00e+00	848.00
IUUC-Oar-089760	Ovis aries	55.16	0.00e+00	684.00
IUUC-Ptr-091445	Pan troglodytes	59.13	0.00e+00	717.00
IUUC-Pan-092484	Papio anubis	59.36	0.00e+00	717.00
IUUC-Psi-093277	Pelodiscus sinensis	53.72	0.00e+00	1095.00
IUUC-Pfo-096469	Poecilia formosa	58.75	2.00e-162	566.00
IUUC-Pab-097794	Pongo abelii	59.37	0.00e+00	718.00
IUUC-Pva-103238	Pteropus vampyrus	39.75	0.00e+00	657.00
IUUC-Pgr-103270	Puccinia graminis	41.88	1.00e-64	241.00
IUUC-Ptt-103887	Puccinia triticina	40.92	7.00e-64	238.00
IUUC-Rno-105068	Rattus norvegicus	43.70	0.00e+00	772.00
IUUC-Sha-106713	Sarcophilus harrisii	50.33	0.00e+00	1012.00
IUUC-Sar-113340	Sorex araneus	54.81	0.00e+00	658.00
IUUC-Tru-117776	Takifugu rubripes	64.68	2.00e-156	546.00
IUUC-Tsy-118974	Tarsius syrichta	44.43	0.00e+00	813.00
IUUC-Tni-120774	Tetraodon nigroviridis	65.49	8.00e-153	533.00
IUUC-Ttr-128764	Tursiops truncatus	39.58	0.00e+00	630.00
IUUC-Xtr-132544	Xenopus tropicalis	53.15	2.00e-159	555.00
IUUC-Xma-133131	Xiphophorus maculatus	58.37	2.00e-158	551.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence