iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-08	36.2	157	201

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle++      +d +  + C Hvfh  Cl  w       +++ +CPlCr
   Q: 157  CSICLESLvsgpkpRD-VTRMTCSHVFHNGCLLEW------LKRKNTCPLCR 201
           ********88777555.55588*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSMSSRPEVE VHVTNGRKLS PSEPNSVIIR LKTKSVEIII ENQTTGRQNR RTQVSPPFLI 60
DINLRSSSHD HIRTLLHDRL VGYPFESYLC DDLAPKISTA AIDLGFGHNG FTLTMAATVT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTATGA GTTCTCGTCC TGAAGTGGAA GTTCACGTCA CCAACGGAAG GAAACTCTCT 60
CCATCAGAAC CAAACTCAGT CATCATACGC CTCAAAACCA AATCTGTAGA GATCATTATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ath:AT4G05350

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015413	Brassica oleracea	45.21	1.00e-36	145.00
IUUC-Bra-017344	Brassica rapa	45.13	2.00e-35	141.00
IUUC-Gma-043774	Glycine max	30.06	1.00e-11	62.00
IUUC-Olu-087904	Ostreococcus lucimarinus	34.52	2.00e-12	63.50
IUUC-Pgr-103613	Puccinia graminis	35.25	5.00e-10	57.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence