iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-027934

Ensembl Protein ID

ENSDARP00000128139.2

UniProt Accession

X1WD42; X1WD42_DANRE

Genbank Protein ID

ENSDARP00000128139

Protein Name

FinTRIM family, member 88

Genbank Nucleotide ID

CR853294

Gene Name

ftr88; si:dkey-101o7.6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000097679.2	ENSDART00000156690.2	ENSDARP00000128139.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.40e-07	31.1	10	72
E3 activity/RING/RING	3.30e-07	31.6	15	58

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggk....tcPvtrqplteedlvPnltl 61
            ++f Cp+ l++ ++Pv++p+G++y  s+I  + + +++     cP +r++++++ l   +tl
   Q: 10   VDQFSCPVCLDPLKEPVTIPCGHSYCMSCITDCWSLKEQgppyRCPQCRESFSQRPLLKKNTL 72
           689*****************************9977777779**********99999555554 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C++Cl+++k+ p++ pCgH ++ +C+  +w  + +++ +  rCP Cr
   Q: 15   CPVCLDPLKE-PVTIPCGHSYCMSCItDCW--SLKEQGPPYRCPQCR 58
           ********99.9******************..666699999*****8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MSESSSSQYV DQFSCPVCLD PLKEPVTIPC GHSYCMSCIT DCWSLKEQGP PYRCPQCRES 60
FSQRPLLKKN TLIAEMMETL QKTALQTPAA AAAAVDCDVC TTEKNRAVKS CLQCLASFCQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGTTTCTAT CTGCGGAGAA ATGTCTGAAT CATCCTCGAG TCAGTATGTG GATCAGTTCA 60
GCTGTCCAGT GTGTTTGGAT CCGCTGAAGG AGCCGGTGAC GATTCCCTGT GGACACAGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

KEGG

dre:797531

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence