iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121049

Ensembl Protein ID

EOY08518

UniProt Accession

A0A061EV28; A0A061EV28_THECC

Genbank Protein ID

EOY08518.1

Protein Name

RING/U-box superfamily protein

Genbank Nucleotide ID

CM001883

Gene Name

TCM_023049

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_023049	EOY08518	EOY08518

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.60e-08	33.7	100	142

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl d+  +d +++lp C+H+fh++C+  w       + + +CP+Cr
   Q: 100  CSICLADYksSDTLRLLPdCNHLFHLKCVDPW------LRLHPTCPVCR 142
           ******998855599999**************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MNSTTDSGGF LGSNNIGGFG YGIGVSVGIL LLITTITLAS YFCTRTPPPQ APPRARQEPT 60
LDPESLVVDL GLDEETIKSY PKLLYSEAKL HNKDSTSSCC SICLADYKSS DTLRLLPDCN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGCCACAAC CATGGCTGAC AAGACCACTT TTTTGATCTC CAATTCCTTG TTCTCCTTTC 60
ATTATTCCAG GAAATGAACA GCACAACAGA TTCTGGGGGA TTTCTTGGCT CCAACAACAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001148	Aegilops tauschii	41.05	2.00e-17	80.90
IUUC-Aly-006506	Arabidopsis lyrata	54.35	6.00e-40	155.00
IUUC-Ath-007122	Arabidopsis thaliana	52.33	5.00e-35	139.00
IUUC-Bol-016119	Brassica oleracea	61.88	9.00e-37	145.00
IUUC-Bra-017974	Brassica rapa	53.40	2.00e-41	160.00
IUUC-Hvu-047601	Hordeum vulgare	48.61	3.00e-17	79.70
IUUC-Mtr-058770	Medicago truncatula	69.28	8.00e-38	148.00
IUUC-Mga-059435	Meleagris gallopavo	40.00	9.00e-13	65.90
IUUC-Mac-065006	Musa acuminata	73.40	1.00e-31	128.00
IUUC-Obr-076328	Oryza brachyantha	49.33	2.00e-18	84.70
IUUC-Opu-083306	Oryza punctata	57.55	2.00e-22	98.20
IUUC-Oru-085270	Oryza rufipogon	54.55	5.00e-23	100.00
IUUC-Osa-085759	Oryza sativa	54.55	5.00e-23	100.00
IUUC-Ppa-095252	Physcomitrella patens	42.86	5.00e-31	126.00
IUUC-Pop-099253	Populus trichocarpa	75.76	1.00e-42	164.00
IUUC-Ppe-101919	Prunus persica	81.33	7.00e-44	168.00
IUUC-Pgr-103601	Puccinia graminis	37.97	5.00e-12	63.90
IUUC-Smo-109152	Selaginella moellendorffii	45.70	5.00e-30	122.00
IUUC-Sit-110656	Setaria italica	58.76	2.00e-26	111.00
IUUC-Sly-111057	Solanum lycopersicum	76.24	4.00e-35	139.00
IUUC-Stu-112602	Solanum tuberosum	72.64	2.00e-35	140.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence