iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-108963

Ensembl Protein ID

EFJ20581

UniProt Accession

D8S5E2; D8S5E2_SELML

Genbank Protein ID

EFJ20581.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377602

Gene Name

SELMODRAFT_152654

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_152654	EFJ20581	EFJ20581

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-24	86.1	61	96

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH + v+ ++f ++ ++lvsGsdD++i  WD+  g+
   Q: 61   GHRGCVNTVHFnPSgDRLVSGSDDKQIIFWDWMAGR 96
           8***********666****************98876 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MDCDGASASR SSTPALELYK CRHFELYKRE IGSLRPSLYA HRIGGCEDMV QRLKEFRRLS 60
GHRGCVNTVH FNPSGDRLVS GSDDKQIIFW DWMAGRKKLI YHSGHEQNVF QARIMPFSDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAATCTTTTG TGACCTAAGT AGAATCGCGG TATCATGGGA GACGTCCCGT GAAAATCCCT 60
AGCCGGGAGA CGAGAGCTGC GAGCGAGCGC GCTACGATGG ACTGCGATGG CGCTTCGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_152654

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000985	Aegilops tauschii	46.90	2.00e-114	405.00
IUUC-Atr-002578	Amborella trichopoda	53.80	2.00e-144	504.00
IUUC-Aly-005818	Arabidopsis lyrata	50.95	8.00e-122	429.00
IUUC-Ath-006585	Arabidopsis thaliana	48.67	1.00e-119	422.00
IUUC-Bdi-014538	Brachypodium distachyon	47.28	1.00e-106	379.00
IUUC-Bol-016291	Brassica oleracea	47.38	3.00e-123	434.00
IUUC-Bra-017588	Brassica rapa	47.54	4.00e-122	430.00
IUUC-Hvu-047687	Hordeum vulgare	48.66	9.00e-123	432.00
IUUC-Lpe-051191	Leersia perrieri	51.41	1.00e-118	419.00
IUUC-Mac-064558	Musa acuminata	50.75	1.00e-132	466.00
IUUC-Ogl-077243	Oryza glaberrima	49.14	5.00e-128	450.00
IUUC-Oin-080061	Oryza indica	48.34	3.00e-111	395.00
IUUC-Olo-080308	Oryza longistaminata	51.36	5.00e-119	420.00
IUUC-Oni-083114	Oryza nivara	50.80	5.00e-127	447.00
IUUC-Opu-083288	Oryza punctata	52.64	5.00e-122	430.00
IUUC-Osa-085895	Oryza sativa	49.14	5.00e-128	450.00
IUUC-Pno-095149	Phaeosphaeria nodorum	45.35	2.00e-17	84.30
IUUC-Pgr-103528	Puccinia graminis	23.19	3.00e-12	65.90
IUUC-Stu-111978	Solanum tuberosum	54.57	3.00e-130	457.00
IUUC-Tae-125509	Triticum aestivum	46.72	3.00e-120	424.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence