iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pyt-104737

Ensembl Protein ID

EDU46674

UniProt Accession

B2W338; B2W338_PYRTR

Genbank Protein ID

EDU46674.1

Protein Name

Poly(A)+ RNA export protein

Genbank Nucleotide ID

DS231617

Gene Name

PTRG_03836

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTRG_03836	EDU46674	EDU46674

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-21	74.0	121	153

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sd.tllvsGsdDgtikvWDl 30
           H++++ c+++    + +++++Gs+D+t+k WDl
   Q: 121  HENGIKCVRWfqtGGkDYVATGSWDKTVKFWDL 153
           99*********964489***************8 PP

Organism

Pyrenophora triticirepentis

Protein Sequence
(Fasta)

MTLFGQAAAP AASSTTGDTS KDVEVPQGQV PSDSVSDLQF SPTNDFLAVG SWDKKVYIYE 60
VNQNGANGKW MFECQGPVLG LGWSKDGTRI AAGDATGMLN IVDFRTAPAS GTVPAQQAKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACTCTCT TTGGTCAAGC CGCAGCGCCT GCTGCTAGCT CTACCACAGG CGACACAAGT 60
AAAGACGTCG AGGTCCCACA AGGCCAAGTA CCCAGCGACA GCGTGTCCGA TCTGCAGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005643--C:nuclear pore
GO:0016973--P:poly(A)+ mRNA export from nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000293	Aegilops tauschii	36.42	5.00e-59	219.00
IUUC-Aml-002179	Ailuropoda melanoleuca	41.16	2.00e-66	243.00
IUUC-Atr-002609	Amborella trichopoda	40.79	3.00e-68	250.00
IUUC-Apl-003637	Anas platyrhynchos	41.74	5.00e-67	246.00
IUUC-Aca-005042	Anolis carolinensis	41.74	6.00e-67	246.00
IUUC-Aly-006015	Arabidopsis lyrata	41.27	5.00e-70	256.00
IUUC-Ath-007659	Arabidopsis thaliana	41.57	5.00e-70	256.00
IUUC-Ago-008004	Ashbya gossypii	47.89	2.00e-93	333.00
IUUC-Acl-008030	Aspergillus clavatus	62.07	5.00e-130	455.00
IUUC-Afl-008636	Aspergillus flavus	61.49	6.00e-129	451.00
IUUC-Afu-009121	Aspergillus fumigatus	58.86	1.00e-128	451.00
IUUC-Ani-009238	Aspergillus nidulans	61.32	1.00e-128	451.00
IUUC-Ang-009801	Aspergillus niger	59.35	2.00e-129	453.00
IUUC-Aor-009974	Aspergillus oryzae	61.49	6.00e-129	451.00
IUUC-Ate-010406	Aspergillus terreus	59.62	2.00e-128	450.00
IUUC-Ame-011368	Astyanax mexicanus	42.61	1.00e-68	251.00
IUUC-Bgr-012233	Blumeria graminis	57.79	1.00e-117	414.00
IUUC-Bta-012856	Bos taurus	41.16	2.00e-66	243.00
IUUC-Bci-013964	Botrytis cinerea	56.66	1.00e-115	407.00
IUUC-Bdi-015050	Brachypodium distachyon	38.64	3.00e-62	230.00
IUUC-Bol-016601	Brassica oleracea	40.66	1.00e-67	248.00
IUUC-Bra-017292	Brassica rapa	40.96	4.00e-68	249.00
IUUC-Cel-018563	Caenorhabditis elegans	36.55	9.00e-57	212.00
IUUC-Cja-019700	Callithrix jacchus	40.87	4.00e-66	243.00
IUUC-Cfa-020337	Canis familiaris	40.87	3.00e-66	243.00
IUUC-Cpo-021858	Cavia porcellus	41.45	3.00e-67	246.00
IUUC-Cre-022748	Chlamydomonas reinhardtii	43.52	2.00e-70	257.00
IUUC-Csa-023322	Chlorocebus sabaeus	40.87	4.00e-66	243.00
IUUC-Cin-025393	Ciona intestinalis	38.38	1.00e-66	244.00
IUUC-Csv-026093	Ciona savignyi	38.59	2.00e-67	247.00
IUUC-Cgl-026503	Colletotrichum gloeosporioides	49.86	2.00e-92	330.00
IUUC-Cne-026774	Cryptococcus neoformans	44.79	1.00e-75	275.00
IUUC-Cme-027243	Cyanidioschyzon merolae	34.34	1.00e-52	198.00
IUUC-Dre-028159	Danio rerio	42.32	3.00e-68	250.00
IUUC-Dno-028852	Dasypus novemcinctus	40.87	3.00e-66	243.00
IUUC-Dse-031161	Dothistroma septosporum	57.71	2.00e-117	413.00
IUUC-Dme-032009	Drosophila melanogaster	43.45	3.00e-68	250.00
IUUC-Eca-033306	Equus caballus	40.58	1.00e-65	241.00
IUUC-Fca-035579	Felis catus	40.87	3.00e-66	243.00
IUUC-Fal-037582	Ficedula albicollis	41.45	6.00e-67	246.00
IUUC-Fox-037772	Fusarium oxysporum	55.06	1.00e-115	407.00
IUUC-Fso-038368	Fusarium solani	57.03	3.00e-120	422.00
IUUC-Gmo-038500	Gadus morhua	42.32	1.00e-67	248.00
IUUC-Ggr-040019	Gaeumannomyces graminis	61.37	5.00e-128	448.00
IUUC-Gga-040684	Gallus gallus	41.45	1.00e-66	244.00
IUUC-Gac-042592	Gasterosteus aculeatus	42.03	2.00e-67	247.00
IUUC-Gma-043683	Glycine max	38.74	2.00e-70	257.00
IUUC-Ggo-044965	Gorilla gorilla	41.16	1.00e-66	245.00
IUUC-Hsa-046779	Homo sapiens	41.38	3.00e-63	234.00
IUUC-Hvu-047380	Hordeum vulgare	38.64	8.00e-63	232.00
IUUC-Itr-048819	Ictidomys tridecemlineatus	40.87	4.00e-66	243.00
IUUC-Kpa-049284	Komagataella pastoris	46.11	1.00e-93	334.00
IUUC-Lch-050559	Latimeria chalumnae	37.98	5.00e-58	216.00
IUUC-Lpe-051050	Leersia perrieri	39.02	6.00e-68	249.00
IUUC-Loc-052874	Lepisosteus oculatus	42.61	3.00e-68	250.00
IUUC-Lma-053085	Leptosphaeria maculans	85.12	0.00e+00	639.00
IUUC-Laf-053980	Loxodonta africana	40.87	3.00e-66	243.00
IUUC-Mcc-055408	Macaca mulatta	40.87	4.00e-66	243.00
IUUC-Meu-056551	Macropus eugenii	39.83	2.00e-61	228.00
IUUC-Mor-057248	Magnaporthe oryzae	60.27	2.00e-126	443.00
IUUC-Mpo-057390	Magnaporthe poae	60.82	5.00e-126	442.00
IUUC-Mtr-058608	Medicago truncatula	41.40	8.00e-71	258.00
IUUC-Mla-059155	Melampsora laricipopulina	44.39	4.00e-83	299.00
IUUC-Mga-060140	Meleagris gallopavo	41.37	4.00e-60	223.00
IUUC-Mvi-060311	Microbotryum violaceum	48.74	8.00e-97	345.00
IUUC-Mmr-061533	Microcebus murinus	41.16	8.00e-67	245.00
IUUC-Mdo-062593	Monodelphis domestica	41.45	7.00e-67	245.00
IUUC-Mmu-063362	Mus musculus	40.87	2.00e-66	244.00
IUUC-Mac-064968	Musa acuminata	37.80	4.00e-64	236.00
IUUC-Mpu-065722	Mustela putorius furo	41.16	2.00e-66	244.00
IUUC-Mlu-068124	Myotis lucifugus	40.87	5.00e-66	243.00
IUUC-Nfi-068595	Neosartorya fischeri	58.86	6.00e-129	451.00
IUUC-Ncr-068790	Neurospora crassa	57.91	5.00e-122	429.00
IUUC-Opr-070320	Ochotona princeps	37.68	4.00e-58	216.00
IUUC-Ont-071303	Oreochromis niloticus	42.03	8.00e-68	248.00
IUUC-Oan-073724	Ornithorhynchus anatinus	41.45	1.00e-66	244.00
IUUC-Ocu-074961	Oryctolagus cuniculus	41.69	8.00e-64	235.00
IUUC-Oba-075250	Oryza barthii	39.24	2.00e-67	247.00
IUUC-Obr-076326	Oryza brachyantha	39.94	5.00e-69	252.00
IUUC-Ogl-077767	Oryza glaberrima	39.02	6.00e-68	249.00
IUUC-Ogu-078760	Oryza glumaepatula	39.24	2.00e-67	247.00
IUUC-Oin-080219	Oryza indica	39.02	6.00e-68	249.00
IUUC-Olo-081007	Oryza longistaminata	39.02	6.00e-68	249.00
IUUC-Ome-081848	Oryza meridionalis	36.89	9.00e-64	235.00
IUUC-Oni-082844	Oryza nivara	39.02	6.00e-68	249.00
IUUC-Opu-083511	Oryza punctata	36.36	8.00e-63	232.00
IUUC-Oru-085012	Oryza rufipogon	39.02	6.00e-68	249.00
IUUC-Osa-085287	Oryza sativa	39.02	6.00e-68	249.00
IUUC-Ola-087292	Oryzias latipes	42.03	2.00e-68	250.00
IUUC-Olu-087689	Ostreococcus lucimarinus	44.82	2.00e-76	277.00
IUUC-Oga-088821	Otolemur garnettii	40.87	3.00e-66	243.00
IUUC-Oar-090253	Ovis aries	40.87	3.00e-66	243.00
IUUC-Ptr-091097	Pan troglodytes	40.87	3.00e-66	243.00
IUUC-Pan-091835	Papio anubis	40.87	4.00e-66	243.00
IUUC-Psi-093000	Pelodiscus sinensis	42.03	6.00e-68	249.00
IUUC-Pma-094273	Petromyzon marinus	39.35	3.00e-66	243.00
IUUC-Pno-094920	Phaeosphaeria nodorum	79.83	3.00e-174	602.00
IUUC-Pfo-096388	Poecilia formosa	42.61	2.00e-69	254.00
IUUC-Pab-097533	Pongo abelii	40.87	4.00e-66	243.00
IUUC-Pop-099348	Populus trichocarpa	42.19	7.00e-67	245.00
IUUC-Ppe-101915	Prunus persica	40.06	4.00e-70	256.00
IUUC-Pva-102233	Pteropus vampyrus	40.87	1.00e-66	244.00
IUUC-Pgr-103342	Puccinia graminis	45.22	1.00e-86	311.00
IUUC-Ptt-103836	Puccinia triticina	45.05	2.00e-87	313.00
IUUC-Pte-104387	Pyrenophora teres	95.59	0.00e+00	709.00
IUUC-Rno-105548	Rattus norvegicus	40.58	4.00e-66	243.00
IUUC-Sce-106379	Saccharomyces cerevisiae	48.49	2.00e-92	330.00
IUUC-Sha-107617	Sarcophilus harrisii	45.64	2.00e-56	210.00
IUUC-Sja-107668	Schizosaccharomyces japonicus	52.44	8.00e-102	361.00
IUUC-Spo-108293	Schizosaccharomyces pombe	53.48	4.00e-112	395.00
IUUC-Smo-109611	Selaginella moellendorffii	43.95	2.00e-76	277.00
IUUC-Sit-110436	Setaria italica	39.48	3.00e-69	253.00
IUUC-Sly-111037	Solanum lycopersicum	41.44	3.00e-72	263.00
IUUC-Sbi-114361	Sorghum bicolor	39.60	2.00e-68	250.00
IUUC-Sre-114922	Sporisorium reilianum	36.98	2.00e-56	211.00
IUUC-Ssc-116305	Sus scrofa	40.87	3.00e-66	243.00
IUUC-Tgu-116751	Taeniopygia guttata	41.45	5.00e-67	246.00
IUUC-Tru-117798	Takifugu rubripes	42.03	8.00e-69	252.00
IUUC-Tsy-119523	Tarsius syrichta	42.69	2.00e-57	214.00
IUUC-Tni-120477	Tetraodon nigroviridis	42.94	9.00e-70	255.00
IUUC-Tca-121802	Theobroma cacao	39.71	3.00e-69	253.00
IUUC-Tre-121994	Trichoderma reesei	58.81	2.00e-117	413.00
IUUC-Tvi-122631	Trichoderma virens	58.43	1.00e-116	410.00
IUUC-Tae-125687	Triticum aestivum	40.00	3.00e-69	253.00
IUUC-Tur-126390	Triticum urartu	40.42	1.00e-68	251.00
IUUC-Tme-127152	Tuber melanosporum	58.62	2.00e-115	406.00
IUUC-Tbe-127319	Tupaia belangeri	32.24	1.00e-26	112.00
IUUC-Ttr-129207	Tursiops truncatus	40.58	6.00e-65	239.00
IUUC-Uma-129342	Ustilago maydis	36.20	7.00e-51	192.00
IUUC-Vda-129865	Verticillium dahliae	58.63	3.00e-124	436.00
IUUC-Vpa-130076	Vicugna pacos	37.58	3.00e-51	193.00
IUUC-Vvi-131104	Vitis vinifera	40.57	8.00e-71	258.00
IUUC-Xtr-132917	Xenopus tropicalis	35.34	4.00e-47	180.00
IUUC-Xma-133615	Xiphophorus maculatus	42.61	2.00e-69	254.00
IUUC-Yli-134431	Yarrowia lipolytica	49.03	7.00e-100	355.00
IUUC-Zma-135142	Zea mays	40.06	3.00e-69	253.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence