iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109571

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377603

Gene Name

SELMODRAFT_418457

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_418457	EFJ20105	EFJ20105

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-08	33.7	992	1021
E3 activity/RING/U-box	1.20e-23	83.7	342	413

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           Ht  vt+la  ++ ++l sGs D+ti+v+ 
   Q: 992  HTKCVTSLAIlPSkHRLYSGSLDKTIRVCK 1021
           9999*****9988799***********665 PP

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceen 72
           +p++f+CpI+++++ dPv+l++G+ty+r++I++wl++g+ tcP+ rqpl +  l   n+ l+rli++w +e+
   Q: 342  PPKDFVCPITNQIFDDPVTLETGQTYERKAIKEWLSRGNVTCPMSRQPLIKVALpRTNYILKRLISDWKAES 413
           79***********************************************999999*************9875 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MASKKRSHNF AAARTPAQIE KIVLSTVGSY ILDQLLDSDR RAEHKKLCTE ALVQHSDNEG 60
GYVDYAEQAV LANLDWGIEA VEEAIRTPHE ETKSARLQHA EKMLQVCALL DVRSEIAGIP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCATCAA AAAAACGTTC TCACAACTTT GCGGCGGCAC GAACACCAGC TCAAATCGAA 60
AAAATCGTCC TCTCCACCGT CGGGAGCTAT ATCTTGGATC AGTTGCTGGA CAGCGATCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2

Pfam

PF04564--U-box

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

smo:SELMODRAFT_418457

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047711	Hordeum vulgare	34.41	1.00e-54	206.00
IUUC-Pgr-103289	Puccinia graminis	31.88	1.00e-05	43.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence