iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042770

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000853

Gene Name

LOC100780991; GLYMA_20G102400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA20G23550	GLYMA20G23550.1	GLYMA20G23550.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-07	33.9	259	300

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC++ +   d  + lpCgH +h dC+  w       s + +CP+Cr
   Q: 259  CAICKDLLgvGDAAKRLPCGHRYHGDCIVPW------LSSRNSCPVCR 300
           ******9988444888***************......**********8 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSEAPPPPTA DASPPPYWCY HCEKRVSVET LANLPDVVCG ECKNGFVESM PTPSRSRSPS 60
ASSDDPYFGS QFLQVLRLIA QSARDDDASP PPPPSRSPEN DFLRIELGGW DNDEENENDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTGAGAAA AGAAAGATGT TGTGTAATTG CCACTTGCAA GAAAACAAGA ACCCGATGCA 60
TTAATATTAT GGTAGAAAAA CTCAATCATA ATAGAGGGAG ACGGGGGAAT AGAAAAGTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

gmx:100780991

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006264	Arabidopsis lyrata	66.23	4.00e-50	191.00
IUUC-Ath-007318	Arabidopsis thaliana	67.74	3.00e-50	192.00
IUUC-Bol-015980	Brassica oleracea	54.55	4.00e-30	124.00
IUUC-Bra-017830	Brassica rapa	57.05	6.00e-38	150.00
IUUC-Mtr-058545	Medicago truncatula	82.00	2.00e-105	375.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence