iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099841

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_590037; POPTR_0001s02180g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s02180	POPTR_0001s02180.1	POPTR_0001s02180.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RBR	30.62	1.00e-47	189.00	IUUC-Hsa-046887

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MRRGKHRIGE SWTVKRLHDH SQHQQKQQQQ EESNLESPSV LSASSQQQYI KKSEHKPSNS 60
QVVSLNSPKS DPPSSSTEVG ASSFGEKVNE NMEKHLHETK KEEIEEKKEE SEPDNGNGVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAAATC TTCTTTTATT CCCAATCCCT GAAATTTTCA GTCCCTCTCC CTGTAAAAAT 60
TGGCCATGAG AAGAGGTAAG CACCGTATCG GGGAGTCCTG GACTGTTAAA CGACTTCACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR006575--RWD-domain
IPR016135--UBQ-conjugating_enzyme/RWD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50908--RWD
PS00518--ZF_RING_1

Pfam

PF01485--IBR
PF05773--RWD

SMART

SM00647--IBR
SM00184--RING
SM00591--RWD

Gene Ontology

GO:0005737--C:cytoplasm
GO:0000151--C:ubiquitin ligase complex
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s02180g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001130	Aegilops tauschii	51.92	3.00e-151	528.00
IUUC-Aml-001458	Ailuropoda melanoleuca	30.26	1.00e-47	183.00
IUUC-Atr-002560	Amborella trichopoda	59.96	1.00e-173	602.00
IUUC-Apl-003680	Anas platyrhynchos	30.33	7.00e-57	214.00
IUUC-Aca-005000	Anolis carolinensis	31.76	6.00e-52	197.00
IUUC-Aly-006288	Arabidopsis lyrata	62.66	0.00e+00	733.00
IUUC-Ath-006719	Arabidopsis thaliana	62.10	0.00e+00	729.00
IUUC-Acl-008213	Aspergillus clavatus	23.70	8.00e-21	95.10
IUUC-Afl-008433	Aspergillus flavus	25.71	2.00e-22	100.00
IUUC-Afu-008772	Aspergillus fumigatus	22.74	1.00e-20	94.40
IUUC-Ani-009249	Aspergillus nidulans	23.41	3.00e-17	83.20
IUUC-Ang-009757	Aspergillus niger	27.48	8.00e-25	107.00
IUUC-Aor-009963	Aspergillus oryzae	25.29	7.00e-22	98.60
IUUC-Ate-010460	Aspergillus terreus	23.72	2.00e-16	80.50
IUUC-Ame-011312	Astyanax mexicanus	30.13	7.00e-56	210.00
IUUC-Bgr-012052	Blumeria graminis	22.19	9.00e-21	94.70
IUUC-Bta-013529	Bos taurus	31.94	2.00e-50	192.00
IUUC-Bci-013729	Botrytis cinerea	22.67	6.00e-17	82.00
IUUC-Bdi-014940	Brachypodium distachyon	53.93	2.00e-155	542.00
IUUC-Bra-016998	Brassica rapa	63.79	0.00e+00	724.00
IUUC-Cel-018547	Caenorhabditis elegans	25.69	1.00e-28	120.00
IUUC-Cja-019791	Callithrix jacchus	30.84	2.00e-49	189.00
IUUC-Cfa-020403	Canis familiaris	30.55	2.00e-49	189.00
IUUC-Cpo-022229	Cavia porcellus	29.74	2.00e-43	169.00
IUUC-Cre-022601	Chlamydomonas reinhardtii	40.93	2.00e-36	144.00
IUUC-Csa-024115	Chlorocebus sabaeus	30.84	8.00e-50	190.00
IUUC-Cho-024911	Choloepus hoffmanni	31.26	8.00e-50	190.00
IUUC-Cin-025578	Ciona intestinalis	30.02	2.00e-45	176.00
IUUC-Csv-026355	Ciona savignyi	29.78	8.00e-48	183.00
IUUC-Cgl-026439	Colletotrichum gloeosporioides	21.62	6.00e-23	101.00
IUUC-Cne-026782	Cryptococcus neoformans	23.75	8.00e-25	107.00
IUUC-Dre-027380	Danio rerio	30.51	8.00e-56	210.00
IUUC-Dno-029640	Dasypus novemcinctus	31.65	2.00e-50	192.00
IUUC-Dor-030681	Dipodomys ordii	31.49	4.00e-50	191.00
IUUC-Dse-031208	Dothistroma septosporum	21.96	3.00e-18	86.30
IUUC-Ete-033122	Echinops telfairi	29.47	3.00e-43	168.00
IUUC-Eca-033755	Equus caballus	31.06	4.00e-49	188.00
IUUC-Eeu-035034	Erinaceus europaeus	34.97	8.00e-15	74.30
IUUC-Fca-036461	Felis catus	31.04	1.00e-49	190.00
IUUC-Fal-037516	Ficedula albicollis	32.38	1.00e-57	216.00
IUUC-Fox-037923	Fusarium oxysporum	23.40	5.00e-05	42.70
IUUC-Fso-038307	Fusarium solani	22.30	2.00e-19	90.90
IUUC-Gmo-039563	Gadus morhua	29.13	4.00e-53	201.00
IUUC-Ggr-039920	Gaeumannomyces graminis	20.96	2.00e-13	70.90
IUUC-Gga-040331	Gallus gallus	31.72	2.00e-56	212.00
IUUC-Gac-042164	Gasterosteus aculeatus	30.39	4.00e-55	208.00
IUUC-Gma-044080	Glycine max	62.50	0.00e+00	716.00
IUUC-Ggo-045257	Gorilla gorilla	31.28	3.00e-49	188.00
IUUC-Hsa-046887	Homo sapiens	30.62	1.00e-49	189.00
IUUC-Hvu-047317	Hordeum vulgare	46.78	4.00e-131	461.00
IUUC-Itr-048199	Ictidomys tridecemlineatus	31.72	2.00e-49	189.00
IUUC-Lch-050155	Latimeria chalumnae	31.25	5.00e-57	214.00
IUUC-Lpe-051669	Leersia perrieri	54.79	2.00e-143	501.00
IUUC-Loc-051779	Lepisosteus oculatus	28.34	4.00e-50	191.00
IUUC-Lma-052969	Leptosphaeria maculans	22.33	2.00e-19	89.70
IUUC-Laf-053488	Loxodonta africana	31.21	4.00e-55	208.00
IUUC-Mcc-054701	Macaca mulatta	30.84	5.00e-50	191.00
IUUC-Meu-056577	Macropus eugenii	24.29	3.00e-19	89.40
IUUC-Mor-057157	Magnaporthe oryzae	23.63	1.00e-18	88.20
IUUC-Mpo-057518	Magnaporthe poae	21.07	2.00e-16	80.50
IUUC-Mtr-058125	Medicago truncatula	62.55	0.00e+00	674.00
IUUC-Mla-059062	Melampsora laricipopulina	26.67	2.00e-17	82.80
IUUC-Mga-059906	Meleagris gallopavo	31.71	6.00e-57	214.00
IUUC-Mvi-060374	Microbotryum violaceum	26.54	2.00e-17	83.20
IUUC-Mmr-061786	Microcebus murinus	30.82	4.00e-49	188.00
IUUC-Mdo-062453	Monodelphis domestica	29.98	1.00e-54	207.00
IUUC-Mmu-063521	Mus musculus	30.13	2.00e-46	179.00
IUUC-Mac-065119	Musa acuminata	60.89	0.00e+00	652.00
IUUC-Mpu-066274	Mustela putorius furo	30.39	5.00e-50	191.00
IUUC-Mlu-067202	Myotis lucifugus	31.42	8.00e-47	180.00
IUUC-Nfi-068564	Neosartorya fischeri	22.30	3.00e-19	89.70
IUUC-Ncr-068823	Neurospora crassa	21.87	2.00e-18	87.40
IUUC-Nle-068987	Nomascus leucogenys	30.62	2.00e-49	189.00
IUUC-Opr-070453	Ochotona princeps	30.53	1.00e-49	190.00
IUUC-Ont-072611	Oreochromis niloticus	30.17	3.00e-52	199.00
IUUC-Oan-073738	Ornithorhynchus anatinus	30.84	7.00e-55	207.00
IUUC-Ocu-074396	Oryctolagus cuniculus	30.60	4.00e-48	184.00
IUUC-Oba-075472	Oryza barthii	53.53	2.00e-147	515.00
IUUC-Obr-076277	Oryza brachyantha	55.58	3.00e-157	548.00
IUUC-Ogl-077046	Oryza glaberrima	52.70	2.00e-145	508.00
IUUC-Ogu-078634	Oryza glumaepatula	53.73	3.00e-148	518.00
IUUC-Oin-080080	Oryza indica	50.46	3.00e-152	531.00
IUUC-Olo-080828	Oryza longistaminata	50.10	2.00e-139	490.00
IUUC-Ome-081387	Oryza meridionalis	49.54	2.00e-154	538.00
IUUC-Oni-082934	Oryza nivara	52.89	2.00e-142	499.00
IUUC-Opu-083719	Oryza punctata	49.06	1.00e-131	462.00
IUUC-Oru-084518	Oryza rufipogon	53.73	3.00e-148	518.00
IUUC-Ola-087312	Oryzias latipes	29.37	2.00e-51	196.00
IUUC-Olu-087661	Ostreococcus lucimarinus	32.07	2.00e-74	273.00
IUUC-Oga-089129	Otolemur garnettii	31.93	2.00e-49	189.00
IUUC-Oar-089839	Ovis aries	31.94	1.00e-50	193.00
IUUC-Ptr-091626	Pan troglodytes	30.62	2.00e-49	189.00
IUUC-Pan-092798	Papio anubis	30.84	5.00e-50	191.00
IUUC-Psi-093253	Pelodiscus sinensis	31.57	1.00e-58	219.00
IUUC-Pma-094512	Petromyzon marinus	30.80	1.00e-59	223.00
IUUC-Pno-094937	Phaeosphaeria nodorum	23.76	1.00e-24	107.00
IUUC-Ppa-095211	Physcomitrella patens	41.00	8.00e-125	440.00
IUUC-Pfo-097049	Poecilia formosa	29.86	3.00e-50	192.00
IUUC-Pab-097911	Pongo abelii	30.07	9.00e-50	190.00
IUUC-Pca-100814	Procavia capensis	25.78	3.00e-27	115.00
IUUC-Ppe-101972	Prunus persica	73.27	0.00e+00	773.00
IUUC-Pva-103038	Pteropus vampyrus	30.99	3.00e-49	189.00
IUUC-Pgr-103277	Puccinia graminis	25.95	8.00e-25	107.00
IUUC-Ptt-103855	Puccinia triticina	24.61	2.00e-21	96.70
IUUC-Pyt-104619	Pyrenophora triticirepentis	22.28	1.00e-17	83.60
IUUC-Rno-106003	Rattus norvegicus	29.82	2.00e-45	176.00
IUUC-Sce-106287	Saccharomyces cerevisiae	26.10	1.00e-18	87.40
IUUC-Sha-106652	Sarcophilus harrisii	30.62	9.00e-55	207.00
IUUC-Spo-108167	Schizosaccharomyces pombe	24.36	9.00e-23	100.00
IUUC-Smo-109393	Selaginella moellendorffii	41.44	3.00e-103	368.00
IUUC-Sit-110529	Setaria italica	52.21	8.00e-131	460.00
IUUC-Sly-111829	Solanum lycopersicum	67.17	0.00e+00	767.00
IUUC-Stu-112811	Solanum tuberosum	69.25	0.00e+00	790.00
IUUC-Sar-113259	Sorex araneus	28.57	5.00e-23	101.00
IUUC-Sbi-114591	Sorghum bicolor	52.24	9.00e-139	486.00
IUUC-Sre-115227	Sporisorium reilianum	23.01	8.00e-19	88.60
IUUC-Ssc-115293	Sus scrofa	30.87	5.00e-50	191.00
IUUC-Tgu-117335	Taeniopygia guttata	31.35	3.00e-56	212.00
IUUC-Tru-118458	Takifugu rubripes	30.92	4.00e-56	211.00
IUUC-Tsy-119475	Tarsius syrichta	30.84	9.00e-40	157.00
IUUC-Tni-119827	Tetraodon nigroviridis	30.11	4.00e-52	198.00
IUUC-Tca-121023	Theobroma cacao	73.02	0.00e+00	797.00
IUUC-Tre-121965	Trichoderma reesei	23.32	6.00e-23	101.00
IUUC-Tvi-122564	Trichoderma virens	22.76	3.00e-22	99.80
IUUC-Tae-124793	Triticum aestivum	53.89	7.00e-140	490.00
IUUC-Tur-126258	Triticum urartu	47.39	8.00e-120	423.00
IUUC-Ttr-128984	Tursiops truncatus	40.91	3.00e-20	92.40
IUUC-Uma-129565	Ustilago maydis	23.54	5.00e-17	82.40
IUUC-Vpa-130301	Vicugna pacos	30.57	2.00e-49	189.00
IUUC-Vvi-131244	Vitis vinifera	71.69	0.00e+00	811.00
IUUC-Xtr-132880	Xenopus tropicalis	31.55	1.00e-57	216.00
IUUC-Xma-134055	Xiphophorus maculatus	30.22	4.00e-54	204.00
IUUC-Yli-134342	Yarrowia lipolytica	24.65	3.00e-26	112.00
IUUC-Zma-135021	Zea mays	52.06	7.00e-146	510.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence