iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099947

Ensembl Protein ID

POPTR_0001s08460.1

UniProt Accession

U5GP01; U5GP01_POPTR

Genbank Protein ID

ERP65308.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTR_0001s08460g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s08460	POPTR_0001s08460.1	POPTR_0001s08460.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.70e-22	78.2	44	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH+++v++l++  +++ l+sG++D+ + vW+
   Q: 44   GHKSEVCGLKWsyDNRELASGGNDNRLFVWN 74
           8**********964499*************9 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEGHRLRVGA LAWSSSMLSS GSRDKSILQR DIRAREDFVS KLSGHKSEVC GLKWSYDNRE 60
LASGGNDNRL FVWNQHSSQP VLKYCDHTAA VKAIAWSPHL HGLLASGGGT ADRCIRFWNT 120

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Nucleotide Sequence
(Fasta)

CTGGATTTCT TCTTGTCTGG TTCTAAGGTC TGCAGTACAC ATCATCTTAA TTGGTCGTCG 60
TTTATCAATT TCTTGCCAGA CGCTGTTAAG TTCTGCGTAG TATAAGTTAA CTGGACGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

pop:POPTR_0001s08460g

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence