iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098917

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_548242; POPTR_0001s11540g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s11540	POPTR_0001s11540.1	POPTR_0001s11540.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.20e-09	37.1	197	235

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++++++   ++ CgHvf+++C++k          + +CP+Cr
   Q: 197  CPICMDELQE-ATSTKCGHVFCKNCIKKA------LAVQKKCPTCR 235
           ********99.888************999......999999****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNLLENFDNN MIFVENLDDN KVFLYHGDNT MDLLGNTDRL EDDLWEAERS YFQHSNLNYP 60
PPIQNNMPLH GMYFPCHPRN FQAEVYGLTR QHQTAQDVEV IDDDIAIISP SMFDQARKKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATTTAC TGGAGAATTT TGACAACAAC ATGATTTTTG TGGAGAACTT AGACGACAAC 60
AAGGTGTTTC TGTATCACGG AGACAACACT ATGGATTTAC TGGGGAATAC AGATCGTCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination

KEGG

pop:POPTR_0001s11540g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ang-009681	Aspergillus niger	41.46	2.00e-06	46.60
IUUC-Cin-025749	Ciona intestinalis	44.26	4.00e-11	60.80
IUUC-Hvu-047630	Hordeum vulgare	32.16	3.00e-18	84.70
IUUC-Lpe-050920	Leersia perrieri	56.14	2.00e-17	82.00
IUUC-Oan-073678	Ornithorhynchus anatinus	56.41	1.00e-08	52.40
IUUC-Ocu-074134	Oryctolagus cuniculus	31.87	2.00e-09	56.20
IUUC-Obr-076675	Oryza brachyantha	56.36	2.00e-17	81.30
IUUC-Ogu-078936	Oryza glumaepatula	54.55	6.00e-17	80.50
IUUC-Oar-089469	Ovis aries	42.37	3.00e-09	54.30
IUUC-Ppa-095567	Physcomitrella patens	44.87	4.00e-17	80.90
IUUC-Sja-107944	Schizosaccharomyces japonicus	35.06	2.00e-08	52.00
IUUC-Sit-109928	Setaria italica	54.39	3.00e-17	81.30
IUUC-Sbi-114398	Sorghum bicolor	58.18	4.00e-09	54.30
IUUC-Tgu-117250	Taeniopygia guttata	48.98	1.00e-09	55.50
IUUC-Tsy-118883	Tarsius syrichta	42.37	3.00e-09	53.50
IUUC-Vvi-130833	Vitis vinifera	35.32	1.00e-25	109.00
IUUC-Xtr-132879	Xenopus tropicalis	44.07	2.00e-09	54.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence