iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098910

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTR_0001s14560g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s14580	POPTR_0001s14580.1	POPTR_0001s14580.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-26	91.9	13	42

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           Ht  +t+++f ++ t l+++s D ++++WD
   Q: 13   HTHIITDVRFrPNsTQLATSSFDTSVRLWD 42
           999********777**************** PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

METLQTECTQ EEHTHIITDV RFRPNSTQLA TSSFDTSVRL WDAAEPRYSL QTFTGHTSHV 60
VSLDFHPKKN DLFCSCDGNN EIRFWNINQY PCTRISKGGT TQVRFQPRIG QLLAAASDNV 120

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Nucleotide Sequence
(Fasta)

ACTACCTTTT TGTTTTTTGT TTTTCAGTAT TCTCATTAAA TGAAATTGTA AAGTTTCATC 60
CATACTATAC TTACAACAAT CGAAGCAGAA AAACATAGGT GGACTAATAA ACATAGGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence