iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099411

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTR_0001s14590g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s14590	POPTR_0001s14590.1	POPTR_0001s14590.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.80e-07	31.0	236	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca C+  +++ p+vl+CgHv++++C+  +       ++  rC  C+
   Q: 236  CAECKKLLFR-PVVLNCGHVYCESCI--I----IPMQGIPRCQFCQ 274
           999*******.999***********9..3....4578888898886 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MENQENNRTP SAEESKMQCQ NDNNYEIPSS KHHHQREEGN DHEEEEDFLG QFQCPVCLDL 60
LYKPVVLACG HFSCFWCVFR CMNGFRESHC PICRHPFNHF PRVCQLLHFL LMKMCPIAYK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAAATC AAGAAAACAA CAGAACCCCA TCAGCAGAAG AATCGAAAAT GCAATGCCAA 60
AACGATAATA ACTATGAAAT TCCATCCTCA AAACATCATC ACCAAAGGGA AGAAGGCAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s14590g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-010800	Astyanax mexicanus	40.85	3.00e-09	56.20
IUUC-Dre-028431	Danio rerio	39.39	3.00e-09	55.80
IUUC-Ppa-095945	Physcomitrella patens	34.63	4.00e-40	158.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence