iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100031

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_752295; POPTR_0001s27050g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s27050	POPTR_0001s27050.1	POPTR_0001s27050.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-10	40.4	34	61

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf.sd.tllvsGsdDgtikvWDlr 31
           v+ + f +d   ++s+s D+ +k+W+  
   Q: 34   VNHVYFsPDgQWVASASFDKFVKLWNGI 61
           788999999999*************955 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKGGAPERLV SGSDDFTMFL WEPAVSKHPK ELLVNHVYFS PDGQWVASAS FDKFVKLWNG 60
ITGKFVAAFR AMLDLFIRSD SRLLLSGSKD STLKAKWPTN MG 102

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Nucleotide Sequence
(Fasta)

ATGAAGGGCG GTGCCCCTGA AAGACTAGTT TCAGGTTCTG ATGATTTCAC CATGTTCCTC 60
TGGGAACCAG CTGTCAGCAA ACACCCTAAA GAGCTCGTAT GACAGGCCAT CAACAGGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027295--Quinoprotein_ADH-like_fam
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005840--C:ribosome
GO:0000027--P:ribosomal large subunit assembly

KEGG

pop:POPTR_0001s27050g

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence